RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FAM227BQ96M60 508 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 ASB2Q96Q27 587 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 FYTTD1Q96QD9 318 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 HIST1H2AAQ96QV6 131 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 MGAT4CQ9UBM8 478 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 POLKQ9UBT6 870 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 STEAP1Q9UHE8 339 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 RGPD1P0DJD0 1748 aa4.83□□□□□ -1.64
COL9A1-206ENST00000470652 FAM208AQ9UK61 1670 aaKnown RBP4.83□□□□□ -1.64
COL9A1-206ENST00000470652 TTC21AQ8NDW8 1320 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 VIRMAQ69YN4 1812 aaKnown RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 WNK3Q9BYP7 1800 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CLCA1A8K7I4 914 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 SPRY2O43597 315 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CAND2O75155 1236 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 LATS1O95835 1130 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CHRM5P08912 532 aaPredicted RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 NHLRC4P0CG21 123 aaPredicted RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CDK4P11802 303 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 SLC5A1P13866 664 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CREB1P16220 341 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 FPR3P25089 353 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 GNALP38405 381 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CASP5P51878 434 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 KCNAB1Q14722 419 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 ST3GAL2Q16842 350 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CERKLQ49MI3 558 aaPredicted RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 SERPINA13PQ6UXR4 307 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 BCDIN3DQ7Z5W3 292 aaKnown RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 CHSY1Q86X52 802 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 ADAMTS18Q8TE60 1221 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 COLEC11Q9BWP8 271 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 HEYLQ9NQ87 328 aaPredicted RBP4.82□□□□□ -1.64
COL9A1-206ENST00000470652 RIMKLBQ9ULI2 386 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 SHANK3Q9BYB0 1731 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 DLG5Q8TDM6 1919 aa4.82□□□□□ -1.64
COL9A1-206ENST00000470652 POM121BA6NF01 834 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 A8MVJ9 347 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 BTBD19C9JJ37 291 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 AGPSO00116 658 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 KPNA5O15131 536 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 ANP32CO43423 234 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 MT-CO3P00414 261 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 TUBB4AP04350 444 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 HOXC9P31274 260 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 RENBPP51606 427 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 PSG6Q00889 435 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 LMAN2Q12907 356 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 EIF4A2Q14240 407 aaKnown RBP4.81□□□□□ -1.64
COL9A1-206ENST00000470652 CLCA4Q14CN2 919 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 CATSPERGQ6ZRH7 1159 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 USP49Q70CQ1 688 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 CCDC146Q8IYE0 955 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 DDB2Q92466 427 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 VPS50Q96JG6 964 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 RITA1Q96K30 269 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 CCDC17Q96LX7 622 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 MMS19Q96T76 1030 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
COL9A1-206ENST00000470652 COL14A1Q05707 1796 aaKnown RBP4.81□□□□□ -1.64
COL9A1-206ENST00000470652 SMG6Q86US8 1419 aaKnown RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 ARHGEF10O15013 1369 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 JCADQ9P266 1359 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 TCRBV5S1A1TA0A578 114 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 ANO9A1A5B4 782 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 APAF1O14727 1248 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 PMM2O15305 246 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 GCATO75600 419 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 USP1O94782 785 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 HMOX1P09601 288 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 CYP2D6P10635 497 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 TSHRP16473 764 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 FGFR2P21802 821 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 RBL1P28749 1068 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 NTSR1P30989 418 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 ABCG1P45844 678 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 STT3AP46977 705 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 PRIM2P49643 509 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 DIO1P49895 249 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 ALDH5A1P51649 535 aaPredicted RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 SRSF7Q16629 238 aaKnown RBP eCLIP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 FAM187BQ17R55 369 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 CLEC9AQ6UXN8 241 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 DPP9Q86TI2 863 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 CCDC33Q8N5R6 958 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 RNF152Q8N8N0 203 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 C11orf44Q8N8P7 122 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 C8orf58Q8NAV2 365 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 CCDC150Q8NCX0 1101 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 WDYHV1Q96HA8 205 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 NAA15Q9BXJ9 866 aaKnown RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 ZBTB26Q9HCK0 441 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 MYO1AQ9UBC5 1043 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms