RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PAAF1Q9BRP4 392 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 C20orf27Q9GZN8 174 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 NUDT5Q9UKK9 219 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 IPPQ9Y573 584 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ATP9BO43861 1147 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 LILRA4P59901 499 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 MRPS5P82675 430 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 PDE1BQ01064 536 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 POU5F1BQ06416 359 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 GPR162Q16538 588 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ZNF410Q86VK4 478 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 P2RY11Q96G91 374 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 NUDCD1Q96RS6 583 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 GAD1Q99259 594 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ZNF670Q9BS34 389 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 NMUR2Q9GZQ4 415 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 TM9SF1O15321 606 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 USP17L7P0C7H9 530 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 TKTL1P51854 596 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 EML3Q32P44 896 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 CELF6Q96J87 481 aaKnown RBP18.4■□□□□ 0.54
MCF2L-221ENST00000469415 UNKQ9C0B0 810 aaKnown RBP18.4■□□□□ 0.54
MCF2L-221ENST00000469415 ARHGEF4Q9NR80 690 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 KRT82Q9NSB4 513 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 OTOFQ9HC10 1997 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 SIP14410 1827 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 ETV4P43268 484 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 STKLD1Q8NE28 680 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 PPP1R36Q96LQ0 422 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 MIPEPQ99797 713 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 EBNA1BP2Q99848 306 aaKnown RBP18.4■□□□□ 0.54
MCF2L-221ENST00000469415 VPS11Q9H270 941 aa18.4■□□□□ 0.54
MCF2L-221ENST00000469415 BCLAF3A2AJT9 711 aaKnown RBP18.39■□□□□ 0.54
MCF2L-221ENST00000469415 HMX2A2RU54 273 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 NDC80O14777 642 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 RFPL1O75677 317 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 CCNB1P14635 433 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 DEUP1Q05D60 604 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 STILQ15468 1287 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 ZBTB6Q15916 424 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 DSTYKQ6XUX3 929 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 CMC1Q7Z7K0 106 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 DNAAF3Q8N9W5 541 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 FBXO27Q8NI29 283 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 E2F7Q96AV8 911 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 ULBP1Q9BZM6 244 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 SIK2Q9H0K1 926 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 PIGVQ9NUD9 493 aa18.39■□□□□ 0.54
MCF2L-221ENST00000469415 KLHL8Q9P2G9 620 aaPredicted RBP18.39■□□□□ 0.54
MCF2L-221ENST00000469415 NUP205Q92621 2012 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 MYBPHLA2RUH7 354 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 CELF2O95319 508 aaKnown RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 NCAM1P13591 858 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 NEK3P51956 506 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 CACNA2D1P54289 1103 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 AQP5P55064 265 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 SLC26A9Q7LBE3 791 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 GPRIN1Q7Z2K8 1008 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 RNF139Q8WU17 664 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 DENND2DQ9H6A0 471 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 ANLNQ9NQW6 1124 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 TRIP12Q14669 1992 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 YJEFN3A6XGL0 299 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 E7ENQ6 273 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 MDM4O15151 490 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 GYG2O15488 501 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 STRNO43815 780 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 SKAP2O75563 359 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 C6orf222P0C671 652 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 DPYSL2Q16555 572 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 NBPF20Q3BBV1 942 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 KIAA0319Q5VV43 1072 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 RSPH3Q86UC2 560 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 OR52K1Q8NGK4 314 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 RNF34Q969K3 372 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 MCUR1Q96AQ8 359 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 ALKBH8Q96BT7 664 aaKnown RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 EBF4Q9BQW3 602 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 KCNK13Q9HB14 408 aa18.39■□□□□ 0.53
MCF2L-221ENST00000469415 DDX43Q9NXZ2 648 aaKnown RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
MCF2L-221ENST00000469415 C2CD2LO14523 706 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 FCHO1O14526 889 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 KRT38O76015 456 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 SRGAP2BP0DMP2 458 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 ESRRAP11474 423 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-221ENST00000469415 RAB3IPQ96QF0 476 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-221ENST00000469415 TMEM30AQ9NV96 361 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 SYBUQ9NX95 663 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 INPP5FQ9Y2H2 1132 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 SLC8A3P57103 927 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 MXRA7P84157 204 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 KYAT1Q16773 422 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 LGSNQ5TDP6 509 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 CLPTM1LQ96KA5 538 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 PLLPQ9Y342 182 aa18.38■□□□□ 0.53
MCF2L-221ENST00000469415 H3BRJ5 948 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 PTPN1P18031 435 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms