RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 NT5C1BQ96P26 610 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 GTPBP4Q9BZE4 634 aaKnown RBP25.57■■□□□ 1.68
PTCH1-210ENST00000468211 HOOK1Q9UJC3 728 aaKnown RBP25.57■■□□□ 1.68
PTCH1-210ENST00000468211 KIAA1257Q9ULG3 409 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 WASF3Q9UPY6 502 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 HBS1LQ9Y450 684 aaKnown RBP25.57■■□□□ 1.68
PTCH1-210ENST00000468211 PCDHB4Q9Y5E5 795 aa25.57■■□□□ 1.68
PTCH1-210ENST00000468211 PMM2O15305 246 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 PAEPP09466 180 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 BRD2P25440 801 aaKnown RBP25.56■■□□□ 1.68
PTCH1-210ENST00000468211 STIM1Q13586 685 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 CCDC40Q4G0X9 1142 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 ARHGEF19Q8IW93 802 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 PPM1KQ8N3J5 372 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 CEP76Q8TAP6 659 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 RNF139Q8WU17 664 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 GTPBP2Q9BX10 602 aaKnown RBP25.56■■□□□ 1.68
PTCH1-210ENST00000468211 PRDM16Q9HAZ2 1276 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 CNGB3Q9NQW8 809 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 ABCC13Q9NSE7 274 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 STOML2Q9UJZ1 356 aa25.56■■□□□ 1.68
PTCH1-210ENST00000468211 KCNJ18B7U540 433 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 SPINK2P20155 84 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 HARS2P49590 506 aaKnown RBP25.55■■□□□ 1.68
PTCH1-210ENST00000468211 SGSHP51688 502 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 FOXC1Q12948 553 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 STARD3Q14849 445 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 RRAGAQ7L523 313 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 ELOA2Q8IYF1 753 aaPredicted RBP25.55■■□□□ 1.68
PTCH1-210ENST00000468211 SCML4Q8N228 414 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 CLEC4CQ8WTT0 213 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 UCMAQ8WVF2 138 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 NELFBQ8WX92 580 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 SLC2A11Q9BYW1 496 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 CIPCQ9C0C6 399 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 USP36Q9P275 1121 aaKnown RBP25.55■■□□□ 1.68
PTCH1-210ENST00000468211 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.55■■□□□ 1.68
PTCH1-210ENST00000468211 NUMA1Q14980 2115 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 AKAP13Q12802 2813 aa25.55■■□□□ 1.68
PTCH1-210ENST00000468211 BIN1O00499 593 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 NPC1O15118 1278 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 GADD45BO75293 160 aaPredicted RBP25.54■■□□□ 1.68
PTCH1-210ENST00000468211 NDUFS2O75306 463 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 MAOBP27338 520 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 HLA-FP30511 346 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 COPAP53621 1224 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 GFPT1Q06210 699 aaPredicted RBP25.54■■□□□ 1.68
PTCH1-210ENST00000468211 SEMA3BQ13214 749 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 CNGA2Q16280 664 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 MPPE1Q53F39 396 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 PIP4P1Q86T03 277 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 METTL3Q86U44 580 aaKnown RBP25.54■■□□□ 1.68
PTCH1-210ENST00000468211 TOE1Q96GM8 510 aaKnown RBP25.54■■□□□ 1.68
PTCH1-210ENST00000468211 ITM2CQ9NQX7 267 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 WSB2Q9NYS7 404 aaPredicted RBP25.54■■□□□ 1.68
PTCH1-210ENST00000468211 CTNND2Q9UQB3 1225 aa25.54■■□□□ 1.68
PTCH1-210ENST00000468211 M0QYV0 167 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 NCAM1P13591 858 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 HLA-EP13747 358 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 CD6P30203 668 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 MORC3Q14149 939 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 EIF4HQ15056 248 aaKnown RBP25.53■■□□□ 1.68
PTCH1-210ENST00000468211 MSANTD2Q6P1R3 559 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 CACUL1Q86Y37 369 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 TMPRSS6Q8IU80 811 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 RGL4Q8IZJ4 473 aa25.53■■□□□ 1.68
PTCH1-210ENST00000468211 ARHGAP33O14559 1287 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 IGLV3-27P01718 113 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 TPMTP51580 245 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 ZNF132P52740 706 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 STX17P56962 302 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 ADGRF1Q5T601 910 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 MINDY1Q8N5J2 469 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 WFDC5Q8TCV5 224 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 TMA16Q96EY4 203 aaKnown RBP25.52■■□□□ 1.68
PTCH1-210ENST00000468211 KREMEN1Q96MU8 473 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 GPR174Q9BXC1 333 aa25.52■■□□□ 1.68
PTCH1-210ENST00000468211 GOLGA6L7A0A1B0GV03 622 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 SYNCRIPO60506 623 aaKnown RBP25.51■■□□□ 1.67
PTCH1-210ENST00000468211 EPHX1P07099 455 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 ATXN3P54252 364 aaPredicted RBP25.51■■□□□ 1.67
PTCH1-210ENST00000468211 KCNH2Q12809 1159 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 RFWD3Q6PCD5 774 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 SERPINA13PQ6UXR4 307 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 ADIPOR2Q86V24 386 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 TRIM59Q8IWR1 403 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 ZNF366Q8N895 744 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 EHBP1Q8NDI1 1231 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 CYB5D2Q8WUJ1 264 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 IRGQQ8WZA9 623 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 SIPA1Q96FS4 1042 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 ABCB8Q9NUT2 735 aa25.51■■□□□ 1.67
PTCH1-210ENST00000468211 SPAARA0A1B0GVQ0 90 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 P4HA2O15460 535 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 TIMM44O43615 452 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 LATS1O95835 1130 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 LTFP02788 710 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 FYNP06241 537 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 SLC6A4P31645 630 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 PPP1R2P41236 205 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms