RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZNF132P52740 706 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 ARID5AQ03989 594 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 ENPP2Q13822 863 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 EIF4HQ15056 248 aaKnown RBP22.01■■□□□ 1.11
COL9A3-207ENST00000467819 WDR45BQ5MNZ6 344 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 BSPRYQ5W0U4 402 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 TMEM215Q68D42 235 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 TMPRSS6Q8IU80 811 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SMARCE1Q969G3 411 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SLC35C1Q96A29 364 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SIPA1Q96FS4 1042 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 GPR174Q9BXC1 333 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SLC2A11Q9BYW1 496 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 USP36Q9P275 1121 aaKnown RBP22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SUSD2Q9UGT4 822 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 WDFY3Q8IZQ1 3526 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 YJEFN3A6XGL0 299 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 KCNJ18B7U540 433 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 E7ENQ6 273 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 O00370 1275 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 HYAL3O43820 417 aaPredicted RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 EPHX1P07099 455 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 VDRP11473 427 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 NCAM1P13591 858 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 LCP1P13796 627 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 GNSP15586 552 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 HOXD9P28356 352 aaPredicted RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 LRRC63Q05C16 580 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 METTL3Q86U44 580 aaKnown RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 PRCCQ92733 491 aaPredicted RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 ITM2CQ9NQX7 267 aa22■■□□□ 1.11
COL9A3-207ENST00000467819 WSB2Q9NYS7 404 aaPredicted RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 HBS1LQ9Y450 684 aaKnown RBP22■■□□□ 1.11
COL9A3-207ENST00000467819 MSI1O43347 362 aaKnown RBP21.99■■□□□ 1.11
COL9A3-207ENST00000467819 SETSIPP0DME0 302 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 TBXAS1P24557 533 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-207ENST00000467819 TPMTP51580 245 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 E2F5Q15329 346 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 MPPE1Q53F39 396 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 ISM2Q6H9L7 571 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 SERPINA13PQ6UXR4 307 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 UBR7Q8N806 425 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 RBBP8NLQ8NC74 664 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-207ENST00000467819 TMEM121BQ9BXQ6 578 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-207ENST00000467819 MIR1-1HGQ9H1L0 117 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 DNAAF2Q9NVR5 837 aaKnown RBP21.99■■□□□ 1.11
COL9A3-207ENST00000467819 ZMIZ1Q9ULJ6 1067 aa21.99■■□□□ 1.11
COL9A3-207ENST00000467819 PIK3R2O00459 728 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 ACADMP11310 421 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 HLA-EP13747 358 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 CD59P13987 128 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 FMO5P49326 533 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 RGS7P49802 495 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 COPAP53621 1224 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 DAOAP59103 153 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 FAM193AP78312 1265 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 TMEM270Q6UE05 265 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 ZCCHC9Q8N567 271 aaKnown RBP21.98■■□□□ 1.11
COL9A3-207ENST00000467819 ENGASEQ8NFI3 743 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 KCTD13Q8WZ19 329 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 TFAP2BQ92481 460 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 ABCC13Q9NSE7 274 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 PCDHB4Q9Y5E5 795 aa21.98■■□□□ 1.11
COL9A3-207ENST00000467819 HLA-FP30511 346 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 GRIK2Q13002 908 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 PKDCCQ504Y2 493 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 FNDC3BQ53EP0 1204 aaKnown RBP21.97■■□□□ 1.11
COL9A3-207ENST00000467819 DCAF12L1Q5VU92 463 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 FAM124AQ86V42 546 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 SPATA20Q8TB22 786 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 CYB5D2Q8WUJ1 264 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 GATA6Q92908 595 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 CAMK1GQ96NX5 476 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 NT5C1BQ96P26 610 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 CNGB3Q9NQW8 809 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 KIAA1257Q9ULG3 409 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 FAM208BQ5VWN6 2430 aa21.97■■□□□ 1.11
COL9A3-207ENST00000467819 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 KNL1Q8NG31 2342 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 A0A1B0GTW7 788 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 PSMA7O14818 248 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 TIMM44O43615 452 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 OXTRP30559 389 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 SGSHP51688 502 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 STIM1Q13586 685 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 CCDC40Q4G0X9 1142 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 ADGRF1Q5T601 910 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 LCLAT1Q6UWP7 414 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 CHST9Q7L1S5 443 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 PPM1KQ8N3J5 372 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 ZNF366Q8N895 744 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 CADM4Q8NFZ8 388 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 DNASE2BQ8WZ79 361 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 KAT5Q92993 513 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 TMA16Q96EY4 203 aaKnown RBP21.96■■□□□ 1.11
COL9A3-207ENST00000467819 METTL14Q9HCE5 456 aaKnown RBP21.96■■□□□ 1.11
COL9A3-207ENST00000467819 ABCB8Q9NUT2 735 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 HOOK1Q9UJC3 728 aaKnown RBP21.96■■□□□ 1.11
COL9A3-207ENST00000467819 KLK13Q9UKR3 277 aa21.96■■□□□ 1.11
COL9A3-207ENST00000467819 TMEM131Q92545 1883 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms