RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RIN3Q8TB24 985 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 PHF12Q96QT6 1004 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 TWNKQ96RR1 684 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 UBAP1Q9NZ09 502 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 LCTP09848 1927 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 TCRBV5S1A1TA0A578 114 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 CASQ2O14958 399 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 IL1BP01584 269 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 GSTT2P0CG29 244 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 GSTT2BP0CG30 244 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 CDH2P19022 906 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 TLR1Q15399 786 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 GRAMD1BQ3KR37 738 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 ATF7IP2Q5U623 682 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 IER5Q5VY09 327 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 EFCAB12Q6NXP0 572 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 ANKMY2Q8IV38 441 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 RCOR2Q8IZ40 523 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 TCP10LQ8TDR4 215 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 CCT7Q99832 543 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 VPS37BQ9H9H4 285 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 KIAA1522Q9P206 1035 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 RSL24D1Q9UHA3 163 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 CSADQ9Y600 493 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
SNAPC3-205ENST00000467062 BRCA2P51587 3418 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 POLR2AP24928 1970 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 SGK1O00141 431 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 NFICP08651 508 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 COL6A2P12110 1019 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 KCNA4P22459 653 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 EFNA5P52803 228 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 GDF10P55107 478 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 SNAPC2Q13487 334 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PRKD1Q15139 912 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 CCDC153Q494R4 210 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 RAB6CQ53S08 254 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 RNF111Q6ZNA4 994 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 ZBTB8OSQ8IWT0 167 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 GCNAQ96QF7 691 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 OSBPL6Q9BZF3 934 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 RAB6CQ9H0N0 254 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 KCNK4Q9NYG8 393 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 RRN3Q9NYV6 651 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 TSC22D4Q9Y3Q8 395 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 DTNAQ9Y4J8 743 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 CEPT1Q9Y6K0 416 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 ARHGAP42A6NI28 874 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PFKPQ01813 784 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 ALYREFQ86V81 257 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 CPXM1Q96SM3 734 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 SDCBP2Q9H190 292 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 SELENONQ9NZV5 590 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PPARGC1AQ9UBK2 798 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 PADI4Q9UM07 663 aa18.62■□□□□ 0.57
SNAPC3-205ENST00000467062 H3BSA7 217 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 GPR25O00155 361 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 CNMDO75829 334 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 CALB1P05937 261 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 PSMA2P25787 234 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 PDAP1Q13442 181 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 SLC2A7Q6PXP3 512 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 CHSY1Q86X52 802 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 CPB2Q96IY4 423 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 SMYD3Q9H7B4 428 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 RNF19AQ9NV58 838 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 HESX1Q9UBX0 185 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 RAB26Q9ULW5 256 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 AGTPBP1Q9UPW5 1226 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 hCG_1818297A0A087WSY0 165 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 A0A088AWK7 358 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 C2orf71A6NGG8 1288 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 KRT3P12035 628 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 STIP1P31948 543 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 C16orf72Q14CZ0 275 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 ZNF423Q2M1K9 1284 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 CELF3Q5SZQ8 465 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 ZNF362Q5T0B9 420 aaPredicted RBP18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 SH3PXD2AQ5TCZ1 1133 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 POTEHQ6S545 545 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 TBC1D23Q9NUY8 699 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 SIX4Q9UIU6 781 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 SOX13Q9UN79 622 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 COQ6Q9Y2Z9 468 aa18.61■□□□□ 0.57
SNAPC3-205ENST00000467062 TXNP10599 105 aaKnown RBP18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 S100A1P23297 94 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 CDKN2BP42772 138 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 NUP107P57740 925 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 PSMC1P62191 440 aaKnown RBP18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 APOFQ13790 326 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 USP41Q3LFD5 358 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 ITGB3P05106 788 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 TGFB3P10600 412 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 SERPINB6P35237 376 aa18.6■□□□□ 0.57
SNAPC3-205ENST00000467062 BTKQ06187 659 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms