RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
UBR4-210ENST00000466969 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 CASS4Q9NQ75 786 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 FBXL12Q9NXK8 326 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
UBR4-210ENST00000466969 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 APCP25054 2843 aa13.31□□□□□ -0.28
UBR4-210ENST00000466969 CSMD2Q7Z408 3487 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 SDK2Q58EX2 2172 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 F8VP50 259 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 NEMFO60524 1076 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 HIP1RO75146 1068 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
UBR4-210ENST00000466969 YWHAQP27348 245 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 CCR5P51681 352 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
UBR4-210ENST00000466969 OVGP1Q12889 678 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 FNDC3BQ53EP0 1204 aaKnown RBP13.3□□□□□ -0.28
UBR4-210ENST00000466969 LACTB2Q53H82 288 aaPredicted RBP13.3□□□□□ -0.28
UBR4-210ENST00000466969 ZNF776Q68DI1 518 aaPredicted RBP13.3□□□□□ -0.28
UBR4-210ENST00000466969 NAPEPLDQ6IQ20 393 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 Q6ZUG5 572 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 ASB7Q9H672 318 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 CCSER2Q9H7U1 834 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 NLGN3Q9NZ94 848 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 SCML1Q9UN30 329 aa13.3□□□□□ -0.28
UBR4-210ENST00000466969 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.29□□□□□ -0.28
UBR4-210ENST00000466969 CPED1A4D0V7 1026 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 NEMP2A6NFY4 417 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 HCRTO43612 131 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 TIMM44O43615 452 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 SLC6A4P31645 630 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 UGT1A5P35504 534 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 LIG4P49917 911 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 TUBP50607 506 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 SMTNP53814 917 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 EIF3IQ13347 325 aaKnown RBP13.29□□□□□ -0.28
UBR4-210ENST00000466969 ZNF177Q13360 481 aaPredicted RBP13.29□□□□□ -0.28
UBR4-210ENST00000466969 KCNJ12Q14500 433 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 OSTM1Q86WC4 334 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 DAW1Q8N136 415 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 ZNF366Q8N895 744 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 TEX19Q8NA77 164 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 SYT15Q9BQS2 421 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 DUSP23Q9BVJ7 150 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 SLC12A9Q9BXP2 914 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
UBR4-210ENST00000466969 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
UBR4-210ENST00000466969 PLA2G4CQ9UP65 541 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 UBE4BO95155 1302 aa13.29□□□□□ -0.28
UBR4-210ENST00000466969 LY6G6EA0A0G2JKS1 128 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 PRR19A6NJB7 356 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 FAM189A1O60320 539 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 ATP2C2O75185 946 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 PSMC1P62191 440 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 CDKN3Q16667 212 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 CRTC1Q6UUV9 634 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 RAB11FIP2Q7L804 512 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 EFL1Q7Z2Z2 1120 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 TIPARPQ7Z3E1 657 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 MMP21Q8N119 569 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 WDR48Q8TAF3 677 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 CATSPER2Q96P56 530 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 NTPCRQ9BSD7 190 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 PABPC3Q9H361 631 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 CPSF3Q9UKF6 684 aaKnown RBP13.28□□□□□ -0.28
UBR4-210ENST00000466969 ITGB1BP2Q9UKP3 347 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 U3KQA8 63 aa13.28□□□□□ -0.28
UBR4-210ENST00000466969 SFI1A8K8P3 1242 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 GREM1O60565 184 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
UBR4-210ENST00000466969 JMJD7P0C870 316 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 GIMD1P0DJR0 217 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 MAPTP10636 758 aaKnown RBP13.27□□□□□ -0.29
UBR4-210ENST00000466969 RARGP13631 454 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 PRF1P14222 555 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 XBP1P17861 261 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 MUTP22033 750 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 KRT32Q14532 448 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 STAT4Q14765 748 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.29
UBR4-210ENST00000466969 HAUS3Q68CZ6 603 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 NUP93Q8N1F7 819 aa13.27□□□□□ -0.29
UBR4-210ENST00000466969 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms