RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CCDC33Q8N5R6 958 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 BBS4Q96RK4 519 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 RUSC1Q9BVN2 902 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 BCL2L14Q9BZR8 327 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 AVENQ9NQS1 362 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 AGPAT3Q9NRZ7 376 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 SLC15A5A6NIM6 579 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 USP27XA6NNY8 438 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 PABPC1P11940 636 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ITGB6P18564 788 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 KLRC1P26715 233 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 PSEN2P49810 448 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 TBX4P57082 545 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 MAD2L1Q13257 205 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 C1DQ13901 141 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 FBXW10Q5XX13 1052 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CATSPERGQ6ZRH7 1159 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 GATAD2AQ86YP4 633 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZNF786Q8N393 782 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SCAIQ8N9R8 606 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZSCAN18Q8TBC5 510 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 GLMNQ92990 594 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 PPP1R16AQ96I34 528 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 S100A13Q99584 98 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CHP1Q99653 195 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ACTR8Q9H981 624 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 AGPAT5Q9NUQ2 364 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ITGA11Q9UKX5 1188 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ALG6Q9Y672 507 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 LOC100653049A0A140TA62 436 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PPP1R37O75864 691 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 KRT34O76011 436 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 RTN3O95197 1032 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 POLR2EP19388 210 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 ATP6V1B2P21281 511 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 FLT3P36888 993 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TALDO1P37837 337 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 GLRBP48167 497 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CCT8P50990 548 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TKTL1P51854 596 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 Q4G0T1 1027 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 METTL7BQ6UX53 244 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 AGMOQ6ZNB7 445 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SIX5Q8N196 739 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ABHD16BQ9H3Z7 469 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 DDX4Q9NQI0 724 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 SOHLH2Q9NX45 425 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 STK39Q9UEW8 545 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 KANSL1LA0AUZ9 987 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TMEM114B3SHH9 223 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PRMT3O60678 531 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SGPL1O95470 568 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 THRAP10827 490 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 UMPSP11172 480 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 UQCRBP14927 111 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PSMC3P17980 439 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 AKAP5P24588 427 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CASP7P55210 303 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SOX10P56693 466 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TFDP3Q5H9I0 405 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 IQSEC1Q6DN90 963 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TMEM154Q6P9G4 183 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PTAR1Q7Z6K3 402 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 STRA8Q7Z7C7 330 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 FAM45AQ8TCE6 357 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PPP1R13LQ8WUF5 828 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 FAM120BQ96EK7 910 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 MRIQ9BWK5 157 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SERHL2Q9H4I8 314 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 GPRC5CQ9NQ84 441 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SERHLQ9NQF3 203 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 POLE3Q9NRF9 147 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 GPATCH2LQ9NWQ4 482 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CRYL1Q9Y2S2 319 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 RAD51BO15315 384 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 KRT75O95678 551 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ARP10275 920 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CNTFP26441 200 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CCR1P32246 355 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ARMCX4Q5H9R4 360 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 RETSATQ6NUM9 610 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 VPS33AQ96AX1 596 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TMEM176AQ96HP8 235 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 FAM111AQ96PZ2 611 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SH3GL3Q99963 347 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SPRTNQ9H040 489 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 INTS13Q9NVM9 706 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PCDHAC2Q9Y5I4 1007 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SNCAIPQ9Y6H5 919 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ATRNO75882 1429 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ZNF142P52746 1687 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 TCRBV5S4A2TA0A5A2 114 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PHF20L1A8MW92 1017 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TM9SF1O15321 606 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms