RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 IPO4Q8TEX9 1081 aaKnown RBP9.04□□□□□ -0.96
DDR1-242ENST00000465966 KBTBD7Q8WVZ9 684 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 OVCA2Q8WZ82 227 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 SEMA4DQ92854 862 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 XPO6Q96QU8 1125 aaKnown RBP9.04□□□□□ -0.96
DDR1-242ENST00000465966 NAA15Q9BXJ9 866 aaKnown RBP9.04□□□□□ -0.96
DDR1-242ENST00000465966 EDEM3Q9BZQ6 932 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 ELOVL4Q9GZR5 314 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 NACA2Q9H009 215 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 CRTAC1Q9NQ79 661 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 SPHK2Q9NRA0 654 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 KIAA1522Q9P206 1035 aaPredicted RBP9.04□□□□□ -0.96
DDR1-242ENST00000465966 SIX4Q9UIU6 781 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 COQ4Q9Y3A0 265 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
DDR1-242ENST00000465966 KIF26AQ9ULI4 1882 aaPredicted RBP9.04□□□□□ -0.96
DDR1-242ENST00000465966 A0A1B0GTW7 788 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 A0A1W2PQF6 199 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 MEI4A8MW99 385 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 PMM2O15305 246 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 NRDCO43847 1150 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 GJB3O75712 270 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 CER1O95813 267 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 FAM163BP0C2L3 166 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 PNMA6AP0CW24 399 aaPredicted RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 NDUFV2P19404 249 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 WARSP23381 471 aaKnown RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 HNRNPH3P31942 346 aaKnown RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 GTF2H1P32780 548 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 C19orf57Q0VDD7 668 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 GRIK2Q13002 908 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 RAPGEF1Q13905 1077 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 DUOXA2Q1HG44 320 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 KRT39Q6A163 491 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 GRAMD4Q6IC98 578 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 SV2AQ7L0J3 742 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 LIMS2Q7Z4I7 341 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 ARHGEF19Q8IW93 802 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 ETFBKMTQ8IXQ9 262 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 NUP93Q8N1F7 819 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 ZNF397Q8NF99 534 aaPredicted RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 OR5B17Q8NGF7 314 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 OR6B3Q8NGW1 331 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 FBXO32Q969P5 355 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 CHP1Q99653 195 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 CDC6Q99741 560 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 DESI2Q9BSY9 194 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 SPTLC3Q9NUV7 552 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 ARHGAP20Q9P2F6 1191 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 DKK4Q9UBT3 224 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 APEX2Q9UBZ4 518 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 PCOLCE2Q9UKZ9 415 aa9.03□□□□□ -0.96
DDR1-242ENST00000465966 FASNP49327 2511 aaKnown RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 ANKRD11Q6UB99 2663 aaPredicted RBP9.03□□□□□ -0.96
DDR1-242ENST00000465966 GFRA2O00451 464 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 COCHO43405 550 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 VNN1O95497 513 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 HLA-DRAP01903 254 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 C4BPAP04003 597 aaKnown RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 ZNF883P0CG24 379 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 PTPN1P18031 435 aaKnown RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 TNNI1P19237 187 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 MAOBP27338 520 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 CD6P30203 668 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 PIK3CAP42336 1068 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 TUBP50607 506 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 TNNC1P63316 161 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 STARD3Q14849 445 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 ZACNQ401N2 412 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 KIAA1324Q6UXG2 1013 aaKnown RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 TMPRSS7Q7RTY8 843 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 TMEM25Q86YD3 366 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 TMTC1Q8IUR5 882 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 WDR49Q8IV35 697 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 BBS7Q8IWZ6 715 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 CCAR2Q8N163 923 aaKnown RBP9.02□□□□□ -0.97
DDR1-242ENST00000465966 ACRBPQ8NEB7 543 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 FBXL13Q8NEE6 735 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 KAT5Q92993 513 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 ELMO3Q96BJ8 720 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 PPP1R13BQ96KQ4 1090 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 MRGPRX1Q96LB2 322 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 GABRG3Q99928 467 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 BBS2Q9BXC9 721 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 MIR1-1HGQ9H1L0 117 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.02□□□□□ -0.978e-8■■■■□ 25.6
DDR1-242ENST00000465966 KCND1Q9NSA2 647 aa9.02□□□□□ -0.97
DDR1-242ENST00000465966 WDR35Q9P2L0 1181 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms