RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 SLC2A3P11169 496 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 TFE3P19532 575 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-206ENST00000465560 CDC25BP30305 580 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 CCR1P32246 355 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 OPRD1P41143 372 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 NME3Q13232 169 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 PPP2R5DQ14738 602 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 PON2Q15165 354 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 ASTE1Q2TB18 679 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-206ENST00000465560 ANO4Q32M45 955 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 ADGRF1Q5T601 910 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 CCDC105Q8IYK2 499 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 RXFP2Q8WXD0 754 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 EXOC4Q96A65 974 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 TBCBQ99426 244 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 PIGVQ9NUD9 493 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 NENFQ9UMX5 172 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 NDRG2Q9UN36 371 aaKnown RBP21.09■□□□□ 0.97
PTCD3-206ENST00000465560 SIT1Q9Y3P8 196 aa21.09■□□□□ 0.97
PTCD3-206ENST00000465560 MTF2Q9Y483 593 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-206ENST00000465560 FAM170BA6NMN3 283 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 NEDD8-MDP1E9PL57 170 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 GFRA2O00451 464 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 ADCY5O95622 1261 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 MOCS2O96007 188 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 F9P00740 461 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 MYBL1P10243 752 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 PDGFRAP16234 1089 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 SDC4P31431 198 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 RFC1P35251 1148 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 EIF2DP41214 584 aaKnown RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 PTPN9P43378 593 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 DEUP1Q05D60 604 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 SLC18A3Q16572 532 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 FAM133BQ5BKY9 247 aaKnown RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 TMEM196Q5HYL7 178 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 PLEKHA7Q6IQ23 1121 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 ALKBH5Q6P6C2 394 aaKnown RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 C12orf40Q86WS4 652 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 ETFBKMTQ8IXQ9 262 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 CD101Q93033 1021 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 ZNF653Q96CK0 615 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 BTN2A3PQ96KV6 586 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 MCEEQ96PE7 176 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 CHP1Q99653 195 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 P2RY13Q9BPV8 354 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 BBS2Q9BXC9 721 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 DEF6Q9H4E7 631 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 PARVAQ9NVD7 372 aa21.08■□□□□ 0.97
PTCD3-206ENST00000465560 CNOT8Q9UFF9 292 aaKnown RBP21.08■□□□□ 0.97
PTCD3-206ENST00000465560 ATG2BQ96BY7 2078 aa21.08■□□□□ 0.96
PTCD3-206ENST00000465560 KCNU1A8MYU2 1149 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 ATMINO43313 823 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 PI15O43692 258 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 CACNG3O60359 315 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 PENKP01210 267 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 TYRP14679 529 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 ABCB4P21439 1286 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 GPD1P21695 349 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 RDXP35241 583 aaKnown RBP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 CXCR3P49682 368 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 MTA1Q13330 715 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 MAMLD1Q13495 774 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 CCDC14Q49A88 953 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 BRMS1LQ5PSV4 323 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 FYB2Q5VWT5 728 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 NADSYN1Q6IA69 706 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 SND1Q7KZF4 910 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 ATP6V0D2Q8N8Y2 350 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 RNF34Q969K3 372 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 DDX50Q9BQ39 737 aaKnown RBP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 IRX2Q9BZI1 471 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-206ENST00000465560 SLC12A6Q9UHW9 1150 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
PTCD3-206ENST00000465560 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 NCAM2O15394 837 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 ENDOD1O94919 500 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 CYBBP04839 570 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 SLC6A4P31645 630 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 GALK1P51570 392 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 RPL7AP62424 266 aaKnown RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 GFPT1Q06210 699 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 GRSF1Q12849 480 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 FZD5Q13467 585 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 CCDC122Q5T0U0 273 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 FSTL4Q6MZW2 842 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 DCUN1D2Q6PH85 259 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 STRADAQ7RTN6 431 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 TMEM105Q8N8V8 129 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 CLDN23Q96B33 292 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 P2RY11Q96G91 374 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 XPO6Q96QU8 1125 aaKnown RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 NHEJ1Q9H9Q4 299 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 FBRSL1Q9HCM7 1045 aaKnown RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 ARHGEF38Q9NXL2 777 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 XPO7Q9UIA9 1087 aaKnown RBP21.06■□□□□ 0.96
PTCD3-206ENST00000465560 SCINQ9Y6U3 715 aa21.06■□□□□ 0.96
PTCD3-206ENST00000465560 GOLGA6L7A0A1B0GV03 622 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms