RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CNOT8Q9UFF9 292 aaKnown RBP17.61■□□□□ 0.41
USP39-211ENST00000465282 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 FAM170AA1A519 330 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 OTOL1A6NHN0 477 aaPredicted RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 KCNU1A8MYU2 1149 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 ACSL4O60488 711 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 CYBBP04839 570 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 ADH5P11766 374 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 GPD1P21695 349 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 RDXP35241 583 aaKnown RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 CLCN5P51795 746 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 ZNF143P52747 638 aaPredicted RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 PITX1P78337 314 aaPredicted RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 GFPT1Q06210 699 aaPredicted RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 NME3Q13232 169 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 ZC3H12AQ5D1E8 599 aaKnown RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 LY6G5CQ5SRR4 150 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 TRNP1Q6NT89 227 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 PHLDB2Q86SQ0 1253 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 SUGP1Q8IWZ8 645 aaKnown RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 EMC1Q8N766 993 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 FAM3CQ92520 227 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 CENPIQ92674 756 aaPredicted RBP17.6■□□□□ 0.41
USP39-211ENST00000465282 RNF34Q969K3 372 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 CFAP57Q96MR6 1250 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 TBCBQ99426 244 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 CNPY3Q9BT09 278 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 WDCPQ9H6R7 721 aa17.6■□□□□ 0.41
USP39-211ENST00000465282 KIAA1549LQ6ZVL6 1849 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 TRDMT1O14717 391 aaKnown RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 SCAMP3O14828 347 aaKnown RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 NCAM2O15394 837 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 GSDMDP57764 484 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 RPL7AP62424 266 aaKnown RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 CCDC14Q49A88 953 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 MPPE1Q53F39 396 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 MPP7Q5T2T1 576 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 OTUD1Q5VV17 481 aaPredicted RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 TMEM25Q86YD3 366 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 PBXIP1Q96AQ6 731 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
USP39-211ENST00000465282 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 PIGVQ9NUD9 493 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 INTUQ9ULD6 942 aa17.59■□□□□ 0.41
USP39-211ENST00000465282 TMEM191CA6NGB0 347 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 PRR33A8MZF0 331 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 STK25O00506 426 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 LCA5LO95447 670 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 CYP1A2P05177 515 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 H2AFZP0C0S5 128 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 CYLC1P35663 651 aaPredicted RBP17.58■□□□□ 0.4
USP39-211ENST00000465282 MRE11P49959 708 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 GALCP54803 685 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 ACAP1Q15027 740 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 ANO4Q32M45 955 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 IER5LQ5T953 404 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 H2AFVQ71UI9 128 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 ZNF557Q8N988 423 aaPredicted RBP17.58■□□□□ 0.4
USP39-211ENST00000465282 SPC24Q8NBT2 197 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 TTC8Q8TAM2 541 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 CTNNBL1Q8WYA6 563 aaPredicted RBP17.58■□□□□ 0.4
USP39-211ENST00000465282 BBS2Q9BXC9 721 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 THAP2Q9H0W7 228 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 LUC7LQ9NQ29 371 aaKnown RBP17.58■□□□□ 0.4
USP39-211ENST00000465282 ARHGEF38Q9NXL2 777 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 LCMT1Q9UIC8 334 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 COL4A3Q01955 1670 aa17.58■□□□□ 0.4
USP39-211ENST00000465282 SYNJ2BP-COX16A0A087WUM0 186 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 GFRA2O00451 464 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 CACNG3O60359 315 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 PENKP01210 267 aaPredicted RBP17.57■□□□□ 0.4
USP39-211ENST00000465282 TYRP14679 529 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 DRD1P21728 446 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 MAGEA9P43362 315 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 SOX9P48436 509 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 ATP11AP98196 1134 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 GAB4Q2WGN9 574 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 ARL13BQ3SXY8 428 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 FAM133BQ5BKY9 247 aaKnown RBP17.57■□□□□ 0.4
USP39-211ENST00000465282 TMEM31Q5JXX7 168 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 NUDT18Q6ZVK8 323 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 FBXL6Q8N531 539 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 CCDC26Q8TAB7 109 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 CD101Q93033 1021 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 TMA16Q96EY4 203 aaKnown RBP17.57■□□□□ 0.4
USP39-211ENST00000465282 C1orf74Q96LT6 269 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 HAPLN3Q96S86 360 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 P2RY13Q9BPV8 354 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 SLC2A11Q9BYW1 496 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 LTB4R2Q9NPC1 389 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 COX16Q9P0S2 106 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 CALCOCO1Q9P1Z2 691 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 UVRAGQ9P2Y5 699 aa17.57■□□□□ 0.4
USP39-211ENST00000465282 MYO1AQ9UBC5 1043 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms