RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GRAMD4Q6IC98 578 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 PHLDB2Q86SQ0 1253 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 PHTF2Q8N3S3 785 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 CPXM2Q8N436 756 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 SLC30A5Q8TAD4 765 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 FCRL2Q96LA5 508 aaPredicted RBP17.72■□□□□ 0.43
VPS52-215ENST00000464425 DNAJC7Q99615 494 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 FAM204AQ9H8W3 233 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 SEPT11Q9NVA2 429 aaKnown RBP17.72■□□□□ 0.43
VPS52-215ENST00000464425 COX16Q9P0S2 106 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 R4GN57 208 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 GOLGA8SH3BPF8 625 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 CACNG3O60359 315 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 CYBBP04839 570 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 SLC11A2P49281 568 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 MRE11P49959 708 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 RING1Q06587 406 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 GSE1Q14687 1217 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 PPP2R5DQ14738 602 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 ZNF528Q3MIS6 628 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 ZC3H12AQ5D1E8 599 aaKnown RBP17.71■□□□□ 0.43
VPS52-215ENST00000464425 ADGRF1Q5T601 910 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 MMS22LQ6ZRQ5 1243 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 SLC26A9Q7LBE3 791 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 XYLT1Q86Y38 959 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 ZDHHC17Q8IUH5 632 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 CNGA4Q8IV77 575 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 FAM217AQ8IXS0 508 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 MSANTD4Q8NCY6 345 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 USP33Q8TEY7 942 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 SLC39A13Q96H72 371 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 AGPAT1Q99943 283 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 ZDHHC4Q9NPG8 344 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
VPS52-215ENST00000464425 A0A0A0MRY4 1105 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 CHURC1-FNTBB4DL54 471 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 AKR1B15C9JRZ8 316 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 ACSL4O60488 711 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 MFAP3LO75121 409 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 DAB1O75553 588 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 MOCS2O96007 188 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 PENKP01210 267 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 TIE1P35590 1138 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 TNFRSF4P43489 277 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 DGKGP49619 791 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 KLHL30Q0D2K2 578 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 NNTQ13423 1086 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 TSR1Q2NL82 804 aaKnown RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 PREPLQ4J6C6 727 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 FAM102AQ5T9C2 384 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 E4F1Q66K89 784 aaPredicted RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 RFWD3Q6PCD5 774 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 TRIM72Q6ZMU5 477 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 CCDC33Q8N5R6 958 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 TMA16Q96EY4 203 aaKnown RBP17.7■□□□□ 0.42
VPS52-215ENST00000464425 SYT11Q9BT88 431 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 HAUS4Q9H6D7 363 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 DDIT4Q9NX09 232 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 STOML2Q9UJZ1 356 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 CLEC4EQ9ULY5 219 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 SLC8A2Q9UPR5 921 aa17.7■□□□□ 0.42
VPS52-215ENST00000464425 K7ESF4 209 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 IRAK2O43187 625 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 LATS1O95835 1130 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 IGLV3-25P01717 112 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 SERPING1P05155 500 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 CISD3P0C7P0 127 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 UNGP13051 313 aaPredicted RBP17.69■□□□□ 0.42
VPS52-215ENST00000464425 TDGF1P13385 188 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 SLC6A4P31645 630 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 GBP1P32455 592 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 NOS2P35228 1153 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
VPS52-215ENST00000464425 DMWDQ09019 674 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 NME3Q13232 169 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 CLEC16AQ2KHT3 1053 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 MPPE1Q53F39 396 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 HGSNATQ68CP4 663 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 HEATR6Q6AI08 1181 aaKnown RBP17.69■□□□□ 0.42
VPS52-215ENST00000464425 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 NUDT18Q6ZVK8 323 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 TERB1Q8NA31 727 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 RNF34Q969K3 372 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 AZIN2Q96A70 460 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 C11orf70Q9BRQ4 267 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
VPS52-215ENST00000464425 ZNHIT6Q9NWK9 470 aaKnown RBP17.69■□□□□ 0.42
VPS52-215ENST00000464425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.69■□□□□ 0.42
VPS52-215ENST00000464425 XPO7Q9UIA9 1087 aaKnown RBP17.69■□□□□ 0.42
VPS52-215ENST00000464425 M0QYT0 321 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 APOEP02649 317 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 MMP8P22894 467 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 NBL1P41271 181 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 MATKP42679 507 aa17.68■□□□□ 0.42
VPS52-215ENST00000464425 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms