RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 IQUBQ8NA54 791 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 LSM14AQ8ND56 463 aaKnown RBP15.17■□□□□ 0.02
SMC1A-204ENST00000463684 GOLGA5Q8TBA6 731 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 SKA1Q96BD8 255 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 DHX58Q96C10 678 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 PRORYQ9H606 182 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CLEC4EQ9ULY5 219 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 PCDHGA1Q9Y5H4 931 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 AK5Q9Y6K8 562 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 TSPAN3O60637 253 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 LDOC1O95751 146 aaPredicted RBP15.16■□□□□ 0.02
SMC1A-204ENST00000463684 CTSKP43235 329 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 ZBTB16Q05516 673 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 E2F4Q16254 413 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 C8orf34Q49A92 452 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 LAYNQ6UX15 382 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 RSRC2Q7L4I2 434 aaKnown RBP15.16■□□□□ 0.02
SMC1A-204ENST00000463684 ARHGAP18Q8N392 663 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 RBBP8NLQ8NC74 664 aaPredicted RBP15.16■□□□□ 0.02
SMC1A-204ENST00000463684 BAP1Q92560 729 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 C7orf25Q9BPX7 421 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 ACE2Q9BYF1 805 aaPredicted RBP15.16■□□□□ 0.02
SMC1A-204ENST00000463684 FBRSQ9HAH7 460 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 SGK2Q9HBY8 427 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
SMC1A-204ENST00000463684 ENC1O14682 589 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 PAPSS1O43252 624 aaPredicted RBP15.15■□□□□ 0.02
SMC1A-204ENST00000463684 C1QL1O75973 258 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 C1SP09871 688 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 STK38Q15208 465 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 TTC31Q49AM3 519 aaPredicted RBP15.15■□□□□ 0.02
SMC1A-204ENST00000463684 MPPE1Q53F39 396 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 KCNT1Q5JUK3 1230 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 ERICH6BQ5W0A0 696 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 SPOPLQ6IQ16 392 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 FCRL3Q96P31 734 aaPredicted RBP15.15■□□□□ 0.02
SMC1A-204ENST00000463684 TMEM245Q9H330 911 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 MARCH2Q9P0N8 246 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 NCKAP1Q9Y2A7 1128 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 USP3Q9Y6I4 520 aa15.15■□□□□ 0.02
SMC1A-204ENST00000463684 A0A1B0GTQ1 180 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 VILLO15195 856 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 RFPL3O75679 317 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ITGAVP06756 1048 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ABCB4P21439 1286 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 PIK3CAP42336 1068 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ASPAP45381 313 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 RPS14P62263 151 aaKnown RBP15.14■□□□□ 0.01
SMC1A-204ENST00000463684 RACK1P63244 317 aaKnown RBP15.14■□□□□ 0.01
SMC1A-204ENST00000463684 DLG4P78352 724 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 EHHADHQ08426 723 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 PDE4CQ08493 712 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ZACNQ401N2 412 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ZNF366Q8N895 744 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 GANCQ8TET4 914 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 WFIKKN2Q8TEU8 576 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 CYB5D2Q8WUJ1 264 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 CNDP2Q96KP4 475 aaKnown RBP15.14■□□□□ 0.01
SMC1A-204ENST00000463684 DUSP16Q9BY84 665 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 IMPG2Q9BZV3 1241 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
SMC1A-204ENST00000463684 SUN2Q9UH99 717 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 RAI2Q9Y5P3 530 aa15.14■□□□□ 0.01
SMC1A-204ENST00000463684 ASH1LQ9NR48 2969 aaKnown RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 PVALEFA0A1B0GWK0 134 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 IKBKBO14920 756 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 ATP5BP06576 529 aaKnown RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 C7P10643 843 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 PLA2G2AP14555 144 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 SYT1P21579 422 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 HARS2P49590 506 aaKnown RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 INCA1Q0VD86 236 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 SFSWAPQ12872 951 aaKnown RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 TARDBPQ13148 414 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 KIAA0895LQ68EN5 471 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 SV2AQ7L0J3 742 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 CHST9Q7L1S5 443 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 GATAD2AQ86YP4 633 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 PLD4Q96BZ4 506 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 TWNKQ96RR1 684 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 ELF4Q99607 663 aaPredicted RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 ARID3AQ99856 593 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 NRSN2Q9GZP1 204 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 BLZF1Q9H2G9 400 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 MAGEF1Q9HAY2 307 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 CYP3A43Q9HB55 503 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 PRSS16Q9NQE7 514 aa15.13■□□□□ 0.01
SMC1A-204ENST00000463684 FLNBO75369 2602 aaKnown RBP15.13■□□□□ 0.01
SMC1A-204ENST00000463684 CAPN8A6NHC0 703 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 FAM47DPA6NHR8 397 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms