RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 HCN2Q9UL51 889 aa12.42□□□□□ -0.42
RTCB-202ENST00000463455 NUP205Q92621 2012 aa12.42□□□□□ -0.42
RTCB-202ENST00000463455 THADAQ6YHU6 1953 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 DCLK1O15075 740 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 TRIM24O15164 1050 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 IRAK2O43187 625 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 AP5Z1O43299 807 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 LCP1P13796 627 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 GABRG2P18507 467 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 ERCC5P28715 1186 aaPredicted RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 GPD2P43304 727 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 CREB5Q02930 508 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 CAMK4Q16566 473 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 MAP7D1Q3KQU3 841 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 TOGARAM2Q6ZUX3 1019 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 WFIKKN2Q8TEU8 576 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 PIWIL1Q96J94 861 aaKnown RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 THAP9Q9H5L6 903 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 UBE2TQ9NPD8 197 aaPredicted RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 THAP10Q9P2Z0 257 aaPredicted RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
RTCB-202ENST00000463455 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
RTCB-202ENST00000463455 HMBSP08397 361 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 KRT5P13647 590 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 BCKDHBP21953 392 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 HOXD9P28356 352 aaPredicted RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 SLC11A2P49281 568 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 STARD3Q14849 445 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 SF3A2Q15428 464 aaKnown RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 EXOC3L4Q17RC7 722 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 IL31Q6EBC2 164 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 PGBD3Q8N328 593 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
RTCB-202ENST00000463455 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 DDI1Q8WTU0 396 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 NDRG1Q92597 394 aaKnown RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 EDEM1Q92611 657 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 SERPINB11Q96P15 392 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 MED15Q96RN5 788 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 DDX50Q9BQ39 737 aaKnown RBP12.4□□□□□ -0.42
RTCB-202ENST00000463455 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 ELOVL2Q9NXB9 296 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 CALCOCO1Q9P1Z2 691 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 SFMBT1Q9UHJ3 866 aa12.4□□□□□ -0.42
RTCB-202ENST00000463455 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
RTCB-202ENST00000463455 KHNYNO15037 678 aaKnown RBP12.39□□□□□ -0.43
RTCB-202ENST00000463455 GDF9O60383 454 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 GNA15P30679 374 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 RGS7P49802 495 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 MTA1Q13330 715 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
RTCB-202ENST00000463455 STPG1Q5TH74 334 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 TMEM110Q86TL2 294 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 SHC3Q92529 594 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 BHMTQ93088 406 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
RTCB-202ENST00000463455 P2RY11Q96G91 374 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 ACOX2Q99424 681 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 FBRSQ9HAH7 460 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 TLR6Q9Y2C9 796 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 STON1Q9Y6Q2 735 aa12.39□□□□□ -0.43
RTCB-202ENST00000463455 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 DCDC2BA2VCK2 349 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 TM4SF5O14894 197 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 MSI1O43347 362 aaKnown RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 GLI1P08151 1106 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 NCAM1P13591 858 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 NDUFV2P19404 249 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 MTIF2P46199 727 aaKnown RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 TBX4P57082 545 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 SNX16P57768 344 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 LMAN2Q12907 356 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 KIAA0907Q7Z7F0 614 aaPredicted RBP12.38□□□□□ -0.43
RTCB-202ENST00000463455 CEP76Q8TAP6 659 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 RLN3Q8WXF3 142 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 MRGPRX1Q96LB2 322 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 POPDC2Q9HBU9 364 aa12.38□□□□□ -0.43
RTCB-202ENST00000463455 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms