RNA–Protein interactions for RNA: ENST00000461682.1

NDUFB4-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 3

Gene NDUFB4, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-202ENST00000461682 TSPAN3O60637 253 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 CYP1A1P04798 512 aaPredicted RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 SLC2A3P11169 496 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 NOS2P35228 1153 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 TIE1P35590 1138 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 MRE11P49959 708 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 DMC1Q14565 340 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 ZC3H12AQ5D1E8 599 aaKnown RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 FAM102AQ5T9C2 384 aaPredicted RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 HEATR6Q6AI08 1181 aaKnown RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 TRMT11Q7Z4G4 463 aaKnown RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 XYLT1Q86Y38 959 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 CCDC33Q8N5R6 958 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 TMA16Q96EY4 203 aaKnown RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 P2RY11Q96G91 374 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 SLC2A11Q9BYW1 496 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 IRX2Q9BZI1 471 aaPredicted RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 SEPT11Q9NVA2 429 aaKnown RBP15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 DDIT4Q9NX09 232 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 RRN3Q9NYV6 651 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 SLC12A6Q9UHW9 1150 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 FBXO10Q9UK96 956 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 MMP17Q9ULZ9 603 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 SLC27A6Q9Y2P4 619 aa15.9■□□□□ 0.14
NDUFB4-202ENST00000461682 FANCMQ8IYD8 2048 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 SYNJ2BP-COX16A0A087WUM0 186 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 TYW5A2RUC4 315 aaKnown RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 GOLGA8SH3BPF8 625 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 GFRA2O00451 464 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 KLF8O95600 359 aaPredicted RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 CISD3P0C7P0 127 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 MMP8P22894 467 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 MATKP42679 507 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 NSFP46459 744 aaKnown RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 FNTBP49356 437 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 UBASH3AP57075 661 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 RNASE9P60153 205 aaKnown RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 FAM133BQ5BKY9 247 aaKnown RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 EOGTQ5NDL2 527 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 EMC10Q5UCC4 262 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 RFWD3Q6PCD5 774 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 MMS22LQ6ZRQ5 1243 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 LONP2Q86WA8 852 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 CAMKK1Q8N5S9 505 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 ZNF513Q8N8E2 541 aaPredicted RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 IL17RCQ8NAC3 791 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 TXNDC5Q8NBS9 432 aaKnown RBP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 BAP1Q92560 729 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 RNF34Q969K3 372 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 BTN2A3PQ96KV6 586 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 AGPAT1Q99943 283 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 COX16Q9P0S2 106 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 STAP1Q9ULZ2 295 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
NDUFB4-202ENST00000461682 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 ANTXRLA6NF34 631 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 LILRB5O75023 590 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 APBB3O95704 486 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 ABCB4P21439 1286 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 HOXD9P28356 352 aaPredicted RBP15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 CCR1P32246 355 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 DMWDQ09019 674 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 NME3Q13232 169 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 CLEC16AQ2KHT3 1053 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 C2CD6Q53TS8 623 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 MPP7Q5T2T1 576 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 PIK3R6Q5UE93 754 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 NADSYN1Q6IA69 706 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 LRSAM1Q6UWE0 723 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 ANKS1BQ7Z6G8 1248 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 ALYREFQ86V81 257 aaKnown RBP15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 WDR5BQ86VZ2 330 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 ATP6V0D2Q8N8Y2 350 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 HJURPQ8NCD3 748 aaPredicted RBP15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 TSTD1Q8NFU3 115 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 SLC30A5Q8TAD4 765 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 PCDHB18PQ96TA0 734 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 EDEM3Q9BZQ6 932 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 PIEZO1Q92508 2521 aa15.88■□□□□ 0.13
NDUFB4-202ENST00000461682 VPS13AQ96RL7 3174 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 CCDC163A0A0D9SF12 145 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 PRR23AA6NEV1 266 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 PRRT4C9JH25 899 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 M0QYT0 321 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 GFRA3O60609 400 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 TBL1XO60907 577 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 LMNAP02545 664 aaKnown RBP15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 TPM3P06753 285 aa15.87■□□□□ 0.13
NDUFB4-202ENST00000461682 UNGP13051 313 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms