RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GANQ9H2C0 597 aa16.03■□□□□ 0.16
VARS-219ENST00000461328 LHX5Q9H2C1 402 aa16.03■□□□□ 0.16
VARS-219ENST00000461328 ARRDC1-AS1Q9H2J1 176 aa16.03■□□□□ 0.16
VARS-219ENST00000461328 STARD13Q9Y3M8 1113 aa16.03■□□□□ 0.16
VARS-219ENST00000461328 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.03■□□□□ 0.16
VARS-219ENST00000461328 EML5Q05BV3 1969 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 SYCE3A1L190 88 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 PRRT4C9JH25 899 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 FOXD2O60548 495 aaPredicted RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 PENKP01210 267 aaPredicted RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 CISD3P0C7P0 127 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 ZNF18P17022 549 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NTSR1P30989 418 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 RPL34P49207 117 aaKnown RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 NCAPHQ15003 741 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NUGGCQ68CJ6 796 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 OR6B2Q6IFH4 312 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 TMEM110Q86TL2 294 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 CHPFQ8IZ52 775 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 TMEM35BQ8NCS4 154 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NEK11Q8NG66 645 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 ADAM32Q8TC27 787 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 DQX1Q8TE96 717 aaKnown RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 DDI1Q8WTU0 396 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 HMGB4Q8WW32 186 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 CPXM1Q96SM3 734 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NAA15Q9BXJ9 866 aaKnown RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 DUSP15Q9H1R2 295 aaPredicted RBP16.02■□□□□ 0.16
VARS-219ENST00000461328 POPDC2Q9HBU9 364 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 DLL3Q9NYJ7 618 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 TJP2Q9UDY2 1190 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 NAALADL1Q9UQQ1 740 aa16.02■□□□□ 0.16
VARS-219ENST00000461328 FAM170AA1A519 330 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 GFPT2O94808 682 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 SLC11A2P49281 568 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 ZNF165P49910 485 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 CCDC6Q16204 474 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 ERMP1Q7Z2K6 904 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 DGLUCYQ7Z3D6 616 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 SPACA7Q96KW9 195 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 ACOX2Q99424 681 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 FBXO10Q9UK96 956 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 HCN2Q9UL51 889 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 SLC27A6Q9Y2P4 619 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 DAAM1Q9Y4D1 1078 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 PCDHGA5Q9Y5G8 931 aa16.01■□□□□ 0.15
VARS-219ENST00000461328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16■□□□□ 0.15
VARS-219ENST00000461328 ZBTB24O43167 697 aaPredicted RBP16■□□□□ 0.15
VARS-219ENST00000461328 TSPAN3O60637 253 aa16■□□□□ 0.15
VARS-219ENST00000461328 LATS1O95835 1130 aa16■□□□□ 0.15
VARS-219ENST00000461328 MOCS2O96007 188 aaPredicted RBP16■□□□□ 0.15
VARS-219ENST00000461328 APOEP02649 317 aa16■□□□□ 0.15
VARS-219ENST00000461328 ERBB2P04626 1255 aa16■□□□□ 0.15
VARS-219ENST00000461328 BCKDHBP21953 392 aa16■□□□□ 0.15
VARS-219ENST00000461328 MPLP40238 635 aa16■□□□□ 0.15
VARS-219ENST00000461328 ZNF445P59923 1031 aa16■□□□□ 0.15
VARS-219ENST00000461328 YWHAZP63104 245 aaKnown RBP16■□□□□ 0.15
VARS-219ENST00000461328 PTPN20Q4JDL3 420 aa16■□□□□ 0.15
VARS-219ENST00000461328 MPPE1Q53F39 396 aa16■□□□□ 0.15
VARS-219ENST00000461328 EFHC1Q5JVL4 640 aa16■□□□□ 0.15
VARS-219ENST00000461328 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
VARS-219ENST00000461328 NOP9Q86U38 636 aaKnown RBP16■□□□□ 0.15
VARS-219ENST00000461328 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
VARS-219ENST00000461328 FAM217AQ8IXS0 508 aa16■□□□□ 0.15
VARS-219ENST00000461328 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
VARS-219ENST00000461328 C12orf50Q8NA57 414 aaPredicted RBP16■□□□□ 0.15
VARS-219ENST00000461328 MSANTD4Q8NCY6 345 aa16■□□□□ 0.15
VARS-219ENST00000461328 OLIG1Q8TAK6 271 aa16■□□□□ 0.15
VARS-219ENST00000461328 RLN3Q8WXF3 142 aa16■□□□□ 0.15
VARS-219ENST00000461328 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
VARS-219ENST00000461328 SIK3Q9Y2K2 1263 aa16■□□□□ 0.15
VARS-219ENST00000461328 SYNJ2BP-COX16A0A087WUM0 186 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 EPHB6O15197 1021 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 HSF2BPO75031 334 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 GRAP2O75791 330 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 FYNP06241 537 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 ZNF806P0C7X5 589 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 SOX5P35711 763 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 P2RY2P41231 377 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 STAT1P42224 750 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 TPM4P67936 248 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 CDK17Q00537 523 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 FOXK2Q01167 660 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 CREB5Q02930 508 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 RING1Q06587 406 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 NNTQ13423 1086 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 BYSLQ13895 437 aaKnown RBP15.99■□□□□ 0.15
VARS-219ENST00000461328 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
VARS-219ENST00000461328 TAF5Q15542 800 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
VARS-219ENST00000461328 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms