RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 EIF4HQ15056 248 aaKnown RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 ZNF658Q5TYW1 1059 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 TMPRSS6Q8IU80 811 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 UBR7Q8N806 425 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 DDI1Q8WTU0 396 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 SORCS1Q8WY21 1168 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 DNASE2BQ8WZ79 361 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 CCDC34Q96HJ3 373 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 OLA1Q9NTK5 396 aaKnown RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 RMND1Q9NWS8 449 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 SUSD2Q9UGT4 822 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 CACNA1GO43497 2377 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 KNTC1P50748 2209 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 ANKRD11Q6UB99 2663 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 ACACAQ13085 2346 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 SYNCRIPO60506 623 aaKnown RBP15.36■□□□□ 0.05
SMPD4-216ENST00000461187 NCAM1P13591 858 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 GNSP15586 552 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 HOXD9P28356 352 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-216ENST00000461187 TPMTP51580 245 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 COPAP53621 1224 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
SMPD4-216ENST00000461187 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 E2F5Q15329 346 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 PKDCCQ504Y2 493 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 WDR45BQ5MNZ6 344 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 BSPRYQ5W0U4 402 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 EDEM1Q92611 657 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 SLC35C1Q96A29 364 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 SIPA1Q96FS4 1042 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 TSG101Q99816 390 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 GPR174Q9BXC1 333 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 CIPCQ9C0C6 399 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 LRRC4Q9HBW1 653 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 SFMBT1Q9UHJ3 866 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 HBS1LQ9Y450 684 aaKnown RBP15.36■□□□□ 0.05
SMPD4-216ENST00000461187 NFE2L3Q9Y4A8 694 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 NEUROG3Q9Y4Z2 214 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 ZFYVE26Q68DK2 2539 aa15.36■□□□□ 0.05
SMPD4-216ENST00000461187 DSPP15924 2871 aaKnown RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 TMEM8BA6NDV4 472 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 YJEFN3A6XGL0 299 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 E7ENQ6 273 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 O00370 1275 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 TIMM44O43615 452 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 TSPAN3O60637 253 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 IGLV3-19P01714 112 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 VDRP11473 427 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 CD19P15391 556 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 HARS2P49590 506 aaKnown RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 YWHAEP62258 255 aaKnown RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 MPPE1Q53F39 396 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 SCML4Q8N228 414 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 CADM4Q8NFZ8 388 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 SPATA20Q8TB22 786 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 KCTD13Q8WZ19 329 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 PRCCQ92733 491 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 CAMK1GQ96NX5 476 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 IPO9Q96P70 1041 aaKnown RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 ARMCX3Q9UH62 379 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-216ENST00000461187 STOML2Q9UJZ1 356 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 KLK13Q9UKR3 277 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 MSRB2Q9Y3D2 182 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
SMPD4-216ENST00000461187 FREM2Q5SZK8 3169 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 A0A1B0GTW7 788 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 MEI4A8MW99 385 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 SH3BP5O60239 455 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 GABBR2O75899 941 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 EPHX1P07099 455 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 SETSIPP0DME0 302 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 TBXAS1P24557 533 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-216ENST00000461187 HLA-FP30511 346 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 OXTRP30559 389 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 LRRC63Q05C16 580 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 LRMPQ12912 555 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 GRIK2Q13002 908 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 HNRNPDQ14103 355 aaKnown RBP15.34■□□□□ 0.05
SMPD4-216ENST00000461187 DCAF12L1Q5VU92 463 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 LCLAT1Q6UWP7 414 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 SERPINA13PQ6UXR4 307 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 SIX6OS1Q8N1H7 587 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 ENGASEQ8NFI3 743 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 RNF139Q8WU17 664 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 CNGB3Q9NQW8 809 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 ABCC13Q9NSE7 274 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 RALYQ9UKM9 306 aaKnown RBP15.34■□□□□ 0.05
SMPD4-216ENST00000461187 KIAA1257Q9ULG3 409 aa15.34■□□□□ 0.05
SMPD4-216ENST00000461187 METTL12A8MUP2 240 aa15.33■□□□□ 0.04
SMPD4-216ENST00000461187 H0Y626 953 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms