RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 HPS4Q9NQG7 708 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 SLC12A6Q9UHW9 1150 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 AGO1Q9UL18 857 aaKnown RBP23.36■■□□□ 1.33
C9orf3-209ENST00000460573 PAXBP1Q9Y5B6 917 aa23.36■■□□□ 1.33
C9orf3-209ENST00000460573 APOEP02649 317 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 KLKB1P03952 638 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 DCNP07585 359 aaKnown RBP23.35■■□□□ 1.33
C9orf3-209ENST00000460573 CCR1P32246 355 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 RFC1P35251 1148 aaPredicted RBP23.35■■□□□ 1.33
C9orf3-209ENST00000460573 CYLC1P35663 651 aaPredicted RBP23.35■■□□□ 1.33
C9orf3-209ENST00000460573 PITX1P78337 314 aaPredicted RBP23.35■■□□□ 1.33
C9orf3-209ENST00000460573 PRKCQQ04759 706 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 PPP2R5DQ14738 602 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 UBXN2BQ14CS0 331 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 TRIM68Q6AZZ1 485 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 DENND1CQ8IV53 801 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 EMC1Q8N766 993 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 JOSD2Q8TAC2 188 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 MCEEQ96PE7 176 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 STOML2Q9UJZ1 356 aa23.35■■□□□ 1.33
C9orf3-209ENST00000460573 ENDOD1O94919 500 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 H2AFZP0C0S5 128 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 ARSAP15289 507 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 ABCB4P21439 1286 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 GPD1P21695 349 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 SLC11A2P49281 568 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 GALCP54803 685 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 DEUP1Q05D60 604 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 TNK2Q07912 1038 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 H2AFVQ71UI9 128 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 BNIPLQ7Z465 357 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 DNAAF5Q86Y56 855 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 FAM217AQ8IXS0 508 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 CPXM2Q8N436 756 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 ATP6V0D2Q8N8Y2 350 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 ANP32BQ92688 251 aaKnown RBP23.34■■□□□ 1.33
C9orf3-209ENST00000460573 RNF34Q969K3 372 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 CFAP57Q96MR6 1250 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 TBCBQ99426 244 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 IRX2Q9BZI1 471 aaPredicted RBP23.34■■□□□ 1.33
C9orf3-209ENST00000460573 FOXQ1Q9C009 403 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 GTSE1Q9NYZ3 720 aa23.34■■□□□ 1.33
C9orf3-209ENST00000460573 ADH1CP00326 375 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 CYP1A2P05177 515 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 ZNF143P52747 638 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-209ENST00000460573 NME3Q13232 169 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 DHCR24Q15392 516 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 CCDC14Q49A88 953 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 ZC3H12AQ5D1E8 599 aaKnown RBP23.33■■□□□ 1.33
C9orf3-209ENST00000460573 BRMS1LQ5PSV4 323 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 ADGRF1Q5T601 910 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 TRNP1Q6NT89 227 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 STRADAQ7RTN6 431 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 RALGPS2Q86X27 583 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-209ENST00000460573 PJA1Q8NG27 643 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 BTN2A3PQ96KV6 586 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 BAG1Q99933 345 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-209ENST00000460573 DDX50Q9BQ39 737 aaKnown RBP23.33■■□□□ 1.33
C9orf3-209ENST00000460573 THAP2Q9H0W7 228 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 SPHK2Q9NRA0 654 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 HEBP1Q9NRV9 189 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 SPTLC3Q9NUV7 552 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 MYO1AQ9UBC5 1043 aa23.33■■□□□ 1.33
C9orf3-209ENST00000460573 SYNJ2BP-COX16A0A087WUM0 186 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 KANSL1LA0AUZ9 987 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 TMEM191CA6NGB0 347 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 MAN2B1O00754 1011 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 SCAMP3O14828 347 aaKnown RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 ATMINO43313 823 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 ACSL4O60488 711 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 LCA5LO95447 670 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 GJB6O95452 261 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 RDXP35241 583 aaKnown RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 CXCR3P49682 368 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 RPL7AP62424 266 aaKnown RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 GAD2Q05329 585 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 OTUD1Q5VV17 481 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 RHBDF2Q6PJF5 856 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 TPRG1Q6ZUI0 275 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 FNIP1Q8TF40 1166 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 CTNNBL1Q8WYA6 563 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 CENPIQ92674 756 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 NKD2Q969F2 451 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 EXOC4Q96A65 974 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 CNPY3Q9BT09 278 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 WDCPQ9H6R7 721 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 LUC7LQ9NQ29 371 aaKnown RBP23.32■■□□□ 1.32
C9orf3-209ENST00000460573 PIGVQ9NUD9 493 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 COX16Q9P0S2 106 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 INTUQ9ULD6 942 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 PIAS3Q9Y6X2 628 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 CACNA1HO95180 2353 aa23.32■■□□□ 1.32
C9orf3-209ENST00000460573 KCNU1A8MYU2 1149 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 CYP17A1P05093 508 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 TMEM253P0C7T8 217 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 STARD6P59095 220 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 ATP11AP98196 1134 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 SPA17Q15506 151 aa23.31■■□□□ 1.32
C9orf3-209ENST00000460573 ACBD5Q5T8D3 534 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-209ENST00000460573 MARK1Q9P0L2 795 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms