RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 PLD5Q8N7P1 536 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 ZC3H15Q8WU90 426 aaKnown RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 PGBD4Q96DM1 585 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 GAD1Q99259 594 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 SGIP1Q9BQI5 828 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 SMG5Q9UPR3 1016 aaKnown RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 NCAM1P13591 858 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 GOT1P17174 413 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 STILQ15468 1287 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 WASHC2DQ5SRD0 308 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 CXCL17Q6UXB2 119 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 PIGZQ86VD9 579 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 TTC39CQ8N584 583 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 SLC17A7Q9P2U7 560 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 MAP3K7O43318 606 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 ATP9BO43861 1147 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 PGK1P00558 417 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 CD4P01730 458 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 YY1P25490 414 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 GRM5P41594 1212 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 NDUFV1P49821 464 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 CTU1Q7Z7A3 348 aaKnown RBP15.9■□□□□ 0.14
LMNB1-203ENST00000460265 USP33Q8TEY7 942 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 SNRNP27Q8WVK2 155 aaKnown RBP15.9■□□□□ 0.14
LMNB1-203ENST00000460265 LRMDAQ9H2I8 198 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 PCDH18Q9HCL0 1135 aa15.9■□□□□ 0.14
LMNB1-203ENST00000460265 BHMG1C9JSJ3 638 aaPredicted RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CYP3A5P20815 502 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 SOWAHAQ2M3V2 549 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 IQSEC1Q6DN90 963 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 PDCD7Q8N8D1 485 aaKnown RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 MCRS1Q96EZ8 462 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CENPKQ9BS16 269 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 YIPF2Q9BWQ6 316 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 UBP1Q9NZI7 540 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 IL1RAPL1Q9NZN1 696 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 TMCC1O94876 653 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CBX6O95503 412 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 BCAT1P54687 386 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 BST2Q10589 180 aaKnown RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 KHDC1Q4VXA5 237 aaKnown RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 C9orf57Q5W0N0 161 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 SHCBP1Q8NEM2 672 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 PCDH19Q8TAB3 1148 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 FAM136AQ96C01 138 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 TBCBQ99426 244 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 SPC25Q9HBM1 224 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 SENP1Q9P0U3 644 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 TCRBV9S1A1TA0A576 114 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 B3GAT3O94766 335 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 POMCP01189 267 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 TAC1P20366 129 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 GPX6P59796 221 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 MGAT5Q09328 741 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 MPP3Q13368 585 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CMPK2Q5EBM0 449 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 ZNF410Q86VK4 478 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 NDUFAF2Q8N183 169 aa15.89■□□□□ 0.13
LMNB1-203ENST00000460265 RIBC1Q8N443 379 aaPredicted RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 CMASQ8NFW8 434 aaPredicted RBP15.89■□□□□ 0.13
LMNB1-203ENST00000460265 C17orf102A2RUQ5 167 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
LMNB1-203ENST00000460265 TMED1Q13445 227 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 PDK2Q15119 407 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 PABPC1LQ4VXU2 614 aaKnown RBP15.88■□□□□ 0.13
LMNB1-203ENST00000460265 RNF43Q68DV7 783 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 IGDCC3Q8IVU1 814 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 CDKL3Q8IVW4 592 aaPredicted RBP15.88■□□□□ 0.13
LMNB1-203ENST00000460265 FNIP1Q8TF40 1166 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 MCUR1Q96AQ8 359 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 ZFP69BQ9UJL9 534 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 LOXHD1Q8IVV2 1947 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 DARSP14868 501 aaKnown RBP15.88■□□□□ 0.13
LMNB1-203ENST00000460265 BGNP21810 368 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 GRIA1P42261 906 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 PSEN2P49810 448 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 TKTL1P51854 596 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 ARPP19P56211 112 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 CFAP157Q5JU67 520 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 AGR3Q8TD06 166 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 TRIM55Q9BYV6 548 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 NRDE2Q9H7Z3 1164 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 MANSC1Q9H8J5 431 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 STAP1Q9ULZ2 295 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 NRCAMQ92823 1304 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 PDLIM1O00151 329 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 OPHN1O60890 802 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 MLH1P40692 756 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 SNX17Q15036 470 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 SCN4BQ8IWT1 228 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 CCDC185Q8N715 623 aa15.88■□□□□ 0.13
LMNB1-203ENST00000460265 ENDOVQ8N8Q3 282 aaKnown RBP15.88■□□□□ 0.13
LMNB1-203ENST00000460265 ZNF75CPQ92670 426 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms