RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCDC14Q49A88 953 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 ALKBH5Q6P6C2 394 aaKnown RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 CCDC105Q8IYK2 499 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 MYEOVQ96EZ4 313 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 VCPIP1Q96JH7 1222 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SPHK2Q9NRA0 654 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 RRN3Q9NYV6 651 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 STOML2Q9UJZ1 356 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 NEDD8-MDP1E9PL57 170 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 GFRA2O00451 464 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TRDMT1O14717 391 aaKnown RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 AKR1B10O60218 316 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 MYBL1P10243 752 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 OPRD1P41143 372 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 STARD6P59095 220 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 PON2Q15165 354 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 PIK3R6Q5UE93 754 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 RFWD3Q6PCD5 774 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 RHBDF2Q6PJF5 856 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TPGS1Q6ZTW0 290 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM25Q86YD3 366 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM139Q8IV31 216 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 CPXM2Q8N436 756 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 FLCNQ8NFG4 579 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 PGAP3Q96FM1 320 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 MFSD1Q9H3U5 465 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 C8orf33Q9H7E9 229 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 LTB4R2Q9NPC1 389 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 TMPRSS4Q9NRS4 437 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF510Q9Y2H8 683 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 SCINQ9Y6U3 715 aa13.32□□□□□ -0.28
COL18A1-206ENST00000459895 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 CACNG3O60359 315 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ACSL4O60488 711 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 TSPAN3O60637 253 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 PENKP01210 267 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-206ENST00000459895 PDGFRAP16234 1089 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 HOXD9P28356 352 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-206ENST00000459895 CCR1P32246 355 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 GBP1P32455 592 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 SLC11A2P49281 568 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 CXCR3P49682 368 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-206ENST00000459895 GALCP54803 685 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 HDAC4P56524 1084 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 UBXN2BQ14CS0 331 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ANO4Q32M45 955 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 DCUN1D2Q6PH85 259 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 CHSY1Q86X52 802 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 UNC45BQ8IWX7 931 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ADGRG2Q8IZP9 1017 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 FAM3CQ92520 227 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 EZH1Q92800 747 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-206ENST00000459895 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 ARHGEF38Q9NXL2 777 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 IMPACTQ9P2X3 320 aa13.31□□□□□ -0.28
COL18A1-206ENST00000459895 MTF2Q9Y483 593 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-206ENST00000459895 KANSL1LA0AUZ9 987 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 KCNU1A8MYU2 1149 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 CYP1A2P05177 515 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 TYRP14679 529 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 IRAK1P51617 712 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 MLLT6P55198 1093 aaPredicted RBP13.3□□□□□ -0.28
COL18A1-206ENST00000459895 GAD2Q05329 585 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 MS4A13Q5J8X5 152 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 BRMS1LQ5PSV4 323 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 DAB2IPQ5VWQ8 1189 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
COL18A1-206ENST00000459895 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 PHTF2Q8N3S3 785 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 CCDC185Q8N715 623 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 NAT16Q8N8M0 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms