RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DDI1Q8WTU0 396 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 HMGB4Q8WW32 186 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 ZNF606Q8WXB4 792 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 SHC3Q92529 594 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 KAT5Q92993 513 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 TMA16Q96EY4 203 aaKnown RBP10.43□□□□□ -0.74
HDLBP-228ENST00000459788 PCED1AQ9H1Q7 454 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 ASNSD1Q9NWL6 643 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 ELOVL2Q9NXB9 296 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 TLR6Q9Y2C9 796 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 CHD8Q9HCK8 2581 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 TYW5A2RUC4 315 aaKnown RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 DCLK1O15075 740 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 TRIM24O15164 1050 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 GABBR2O75899 941 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 IGLV3-19P01714 112 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 HMBSP08397 361 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 KRT5P13647 590 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 HOXD9P28356 352 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 OXTRP30559 389 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 GNA15P30679 374 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 ANP32AP39687 249 aaKnown RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 BPIFB4P59827 614 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 CAMK4Q16566 473 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 DAB2IPQ5VWQ8 1189 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 LYSMD4Q5XG99 296 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 SLC23A3Q6PIS1 610 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 TOGARAM2Q6ZUX3 1019 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 IRF2BP1Q8IU81 584 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 AHI1Q8N157 1196 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 PGBD3Q8N328 593 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 KDM1BQ8NB78 822 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 EDEM1Q92611 657 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 SLC39A13Q96H72 371 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 NOX5Q96PH1 765 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 LSM14BQ9BX40 385 aaKnown RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 LHX5Q9H2C1 402 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 PLK2Q9NYY3 685 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 MBD1Q9UIS9 605 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-228ENST00000459788 PILRBQ9UKJ0 227 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 DAAM1Q9Y4D1 1078 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 STON1Q9Y6Q2 735 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 DOCK4Q8N1I0 1966 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 PCDH15Q96QU1 1955 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
HDLBP-228ENST00000459788 CEP295Q9C0D2 2601 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 CABIN1Q9Y6J0 2220 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ADAMTS9Q9P2N4 1935 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 IGHV1OR15-9A0A0B4J2B8 117 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 MED19A0JLT2 244 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 UPK3BL1B0FP48 263 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 UPK3BL2E5RIL1 263 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ACSL4O60488 711 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ATP5BP06576 529 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ADRB1P08588 477 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 SLC2A3P11169 496 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 NCAM1P13591 858 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 NDUFV2P19404 249 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 BCKDHBP21953 392 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 EEF1GP26641 437 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 PON1P27169 355 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 MTIF2P46199 727 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 RGS7P49802 495 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 TBX4P57082 545 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 YWHAZP63104 245 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 PTK2Q05397 1052 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ZBTB16Q05516 673 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 SF3A2Q15428 464 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 GEN1Q17RS7 908 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 DUOXA1Q1HG43 343 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 EFHC1Q5JVL4 640 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ACBD5Q5T8D3 534 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 PIK3R6Q5UE93 754 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ZDHHC17Q8IUH5 632 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 HJURPQ8NCD3 748 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 CADM4Q8NFZ8 388 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 NDRG1Q92597 394 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ZNF419Q96HQ0 510 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 MRGPRX1Q96LB2 322 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ACOX2Q99424 681 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 EDEM2Q9BV94 578 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 NUSAP1Q9BXS6 441 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 NUP62CLQ9H1M0 184 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 PRDM16Q9HAZ2 1276 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 POPDC2Q9HBU9 364 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 TMEM9BQ9NQ34 198 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 ITM2CQ9NQX7 267 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 RRN3Q9NYV6 651 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 CALCOCO1Q9P1Z2 691 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 USP36Q9P275 1121 aaKnown RBP10.41□□□□□ -0.74
HDLBP-228ENST00000459788 SUSD2Q9UGT4 822 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 SFMBT1Q9UHJ3 866 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 PLA2G4CQ9UP65 541 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 KNL1Q8NG31 2342 aa10.41□□□□□ -0.74
HDLBP-228ENST00000459788 LNP1A1A4G5 178 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms