RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CLCN1P35523 988 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ATXN1P54253 815 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 MTA1Q13330 715 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ELF2Q15723 593 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 CSRP2Q16527 193 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ANO7Q6IWH7 933 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 TMEM92Q6UXU6 159 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 C11orf57Q6ZUT1 292 aaPredicted RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 TOGARAM2Q6ZUX3 1019 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ANKS1BQ7Z6G8 1248 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 KBTBD6Q86V97 674 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 SLC47A2Q86VL8 602 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ZDHHC17Q8IUH5 632 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 CCDC117Q8IWD4 279 aaPredicted RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 CHPFQ8IZ52 775 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 TMEM35BQ8NCS4 154 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 DQX1Q8TE96 717 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 TMA16Q96EY4 203 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 SPACA7Q96KW9 195 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 PCMTD1Q96MG8 357 aaPredicted RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 CDV3Q9UKY7 258 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 PCDHGA5Q9Y5G8 931 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 FHOD1Q9Y613 1164 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 SPTBN2O15020 2390 aa18.24■□□□□ 0.51
SCARNA2-201ENST00000458748 ANTXRLA6NF34 631 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 GFRA2O00451 464 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 PAPSS1O43252 624 aaPredicted RBP18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 TIMM44O43615 452 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 HSF2BPO75031 334 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 ADAM23O75077 832 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 EPN2O95208 641 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 IGLV3-27P01718 113 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 APOEP02649 317 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 SLC2A3P11169 496 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 HOXB2P14652 356 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 ARID5AQ03989 594 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 TYRO3Q06418 890 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 EIF4HQ15056 248 aaKnown RBP18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 PLK5Q496M5 336 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 MPP7Q5T2T1 576 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 PASD1Q8IV76 773 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 MDGA1Q8NFP4 955 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 SEMA4GQ9NTN9 838 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 TMEM51Q9NW97 253 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 CYTH4Q9UIA0 394 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 NAALADL1Q9UQQ1 740 aa18.23■□□□□ 0.51
SCARNA2-201ENST00000458748 SDK1Q7Z5N4 2213 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 PLXND1Q9Y4D7 1925 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 SMTNL1A8MU46 457 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 ACSL4O60488 711 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 CYP11B1P15538 503 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 CDK17Q00537 523 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 ZNF677Q86XU0 584 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 PGBD3Q8N328 593 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 C1orf131Q8NDD1 294 aaKnown RBP18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 SPAG5Q96R06 1193 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 CPXM1Q96SM3 734 aa18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 DUSP15Q9H1R2 295 aaPredicted RBP18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
SCARNA2-201ENST00000458748 TCRBV21S2A2A0A5A6 115 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 PRRT4C9JH25 899 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 F8VZ95 297 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 TRIM24O15164 1050 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 LSM8O95777 96 aaKnown RBP18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 HNRNPLP14866 589 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 STARD3Q14849 445 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 DCAF6Q58WW2 860 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 OR6B2Q6IFH4 312 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 WDTC1Q8N5D0 677 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 HJURPQ8NCD3 748 aaPredicted RBP18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 NEK11Q8NG66 645 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 OLIG1Q8TAK6 271 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 WFIKKN2Q8TEU8 576 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 BPIFA3Q9BQP9 254 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 FAM204AQ9H8W3 233 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 AJAP1Q9UKB5 411 aaPredicted RBP18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 HCN2Q9UL51 889 aa18.21■□□□□ 0.51
SCARNA2-201ENST00000458748 DCDC2BA2VCK2 349 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 LGALS16A8MUM7 142 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 TSPAN3O60637 253 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 TRUB2O95900 331 aaKnown RBP18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 FYNP06241 537 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 UBXN1Q04323 297 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 EGFLAMQ63HQ2 1017 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 DPY19L2P1Q6NXN4 242 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 CAVIN1Q6NZI2 390 aaKnown RBP18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 PRR23CQ6ZRP0 262 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 TAC4Q86UU9 113 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 ATP6V0D2Q8N8Y2 350 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 HMGB4Q8WW32 186 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 PIWIL1Q96J94 861 aaKnown RBP18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 GABRG3Q99928 467 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 TPSD1Q9BZJ3 242 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 ARRDC1-AS1Q9H2J1 176 aa18.2■□□□□ 0.5
SCARNA2-201ENST00000458748 FAM207AQ9NSI2 230 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms