RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PLS3P13797 630 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NCKAP1LP55160 1127 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NPEPPSP55786 919 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 RAC1P63000 192 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 FKBP3Q00688 224 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SREBF2Q12772 1141 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TTLL4Q14679 1199 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TARBP2Q15633 366 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TSC22D1Q15714 1073 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 KNOP1Q1ED39 458 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 HSP90AA4PQ58FG1 418 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MIIPQ5JXC2 388 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CLVS2Q5SYC1 327 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PLA2G4FQ68DD2 849 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 OR7E24Q6IFN5 339 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SWSAP1Q6NVH7 229 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ANGPTL8Q6UXH0 198 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 RAPH1Q70E73 1250 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CATSPER4Q7RTX7 472 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PEX26Q7Z412 305 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NKAIN3Q8N8D7 197 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TEX19Q8NA77 164 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PJA1Q8NG27 643 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SEPT1Q8WYJ6 367 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PRCCQ92733 491 aaPredicted RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TLCD1Q96CP7 247 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CNOT6LQ96LI5 555 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ZNF641Q96N77 438 aaPredicted RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 GPR20Q99678 358 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CLPBQ9H078 707 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SP140LQ9H930 580 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 XPNPEP1Q9NQW7 623 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ZNF302Q9NR11 478 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CYP26B1Q9NR63 512 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 FNIP2Q9P278 1114 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NUP50Q9UKX7 468 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SOX13Q9UN79 622 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 C1orf232A0A0U1RR37 186 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 A0A1W2PQC6 194 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 GRXCR2A6NFK2 248 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ZSCAN5BA6NJL1 495 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 A6NJY4 79 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TGFB1I1O43294 461 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ACSL4O60488 711 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 DGAT1O75907 488 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 DLATP10515 647 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 TYK2P29597 1187 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NMT1P30419 496 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PTGS2P35354 604 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 KRT20P35900 424 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 AP2S1P53680 142 aaPredicted RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 VBP1P61758 197 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 GABREP78334 506 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 RPP38P78345 283 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 GTF2BQ00403 316 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CDR2Q01850 454 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 KRT17Q04695 432 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ARHGAP1Q07960 439 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 LY6KQ17RY6 165 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ALFQ53S48 1182 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 XKR9Q5GH70 373 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ODR4Q5SWX8 454 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 LRRC74BQ6ZQY2 392 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 RHOUQ7L0Q8 258 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 EEPD1Q7L9B9 569 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 PLPPR4Q7Z2D5 763 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 ZC3H18Q86VM9 953 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CCDC28AQ8IWP9 274 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 FAM178BQ8IXR5 827 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 AFAP1L2Q8N4X5 818 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MYCT1Q8N699 235 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SLC17A8Q8NDX2 589 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MCPH1Q8NEM0 835 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SEPT8Q92599 483 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MRRFQ96E11 262 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NLRP4Q96MN2 994 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 C7orf26Q96N11 449 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NOX5Q96PH1 765 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MMS19Q96T76 1030 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MNTQ99583 582 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NTPCRQ9BSD7 190 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 KLHL25Q9H0H3 589 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 OR51B5Q9H339 312 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 DHX33Q9H6R0 707 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 MARCH7Q9H992 704 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 CPA4Q9UI42 421 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 METRNQ9UJH8 293 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 UTP11Q9Y3A2 253 aaKnown RBP7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 STON1Q9Y6Q2 735 aa7.05□□□□□ -1.28
CUBNP3-201ENST00000457461 SFI1A8K8P3 1242 aa7.04□□□□□ -1.28
CUBNP3-201ENST00000457461 CAPN14A8MX76 684 aa7.04□□□□□ -1.28
CUBNP3-201ENST00000457461 F8W8V4 182 aa7.04□□□□□ -1.28
CUBNP3-201ENST00000457461 H0YGN5 161 aa7.04□□□□□ -1.28
CUBNP3-201ENST00000457461 TRIM77I1YAP6 450 aa7.04□□□□□ -1.28
CUBNP3-201ENST00000457461 NKRFO15226 690 aaKnown RBP eCLIP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms