RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 COL5A1P20908 1838 aaPredicted RBP24.34■■□□□ 1.49
PTPRA-208ENST00000455631 KIF20AO95235 890 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 JUPP14923 745 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 PDCP20941 246 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 CD27P26842 260 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 EIF2S3P41091 472 aaKnown RBP24.34■■□□□ 1.49
PTPRA-208ENST00000455631 CTSKP43235 329 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 ASPAP45381 313 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 KIF11P52732 1056 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 CLDN10P78369 228 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 SPOPLQ6IQ16 392 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 FCRL3Q96P31 734 aaPredicted RBP24.34■■□□□ 1.49
PTPRA-208ENST00000455631 TWNKQ96RR1 684 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 CLIC5Q9NZA1 410 aa24.34■■□□□ 1.49
PTPRA-208ENST00000455631 MORC2Q9Y6X9 1032 aaPredicted RBP24.34■■□□□ 1.49
PTPRA-208ENST00000455631 TIMM44O43615 452 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 TLX3O43711 291 aaPredicted RBP24.33■■□□□ 1.49
PTPRA-208ENST00000455631 PLA2G2AP14555 144 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 BCAT1P54687 386 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 UNC13DQ70J99 1090 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 CPXM2Q8N436 756 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 ZNF276Q8N554 614 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 CYB5D2Q8WUJ1 264 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 SLC2A11Q9BYW1 496 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 SLC39A2Q9NP94 309 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 PCDHGA1Q9Y5H4 931 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 AK5Q9Y6K8 562 aa24.33■■□□□ 1.49
PTPRA-208ENST00000455631 PLXNA2O75051 1894 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 RRP8O43159 456 aaKnown RBP24.32■■□□□ 1.48
PTPRA-208ENST00000455631 TSPAN3O60637 253 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 C21orf59P57076 290 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 KNOP1Q1ED39 458 aaKnown RBP24.32■■□□□ 1.48
PTPRA-208ENST00000455631 CNNM4Q6P4Q7 775 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 GATAD2AQ86YP4 633 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 RAI2Q9Y5P3 530 aa24.32■■□□□ 1.48
PTPRA-208ENST00000455631 CBX4O00257 560 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 ENC1O14682 589 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 PAPSS1O43252 624 aaPredicted RBP24.31■■□□□ 1.48
PTPRA-208ENST00000455631 DFNA5O60443 496 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 RFPL3O75679 317 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 DNTTP04053 509 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 RPN1P04843 607 aaKnown RBP24.31■■□□□ 1.48
PTPRA-208ENST00000455631 PIK3CAP42336 1068 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 DLG4P78352 724 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 EHHADHQ08426 723 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 ZACNQ401N2 412 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 TTC31Q49AM3 519 aaPredicted RBP24.31■■□□□ 1.48
PTPRA-208ENST00000455631 RSRC2Q7L4I2 434 aaKnown RBP24.31■■□□□ 1.48
PTPRA-208ENST00000455631 ZNF605Q86T29 641 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 TAF4BQ92750 862 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 C7orf25Q9BPX7 421 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 NT5C1AQ9BXI3 368 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 ACE2Q9BYF1 805 aaPredicted RBP24.31■■□□□ 1.48
PTPRA-208ENST00000455631 TMEM245Q9H330 911 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 MARCH2Q9P0N8 246 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 STRIP2Q9ULQ0 834 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 PLA2G4CQ9UP65 541 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 KNTC1P50748 2209 aa24.31■■□□□ 1.48
PTPRA-208ENST00000455631 A0A1B0GTQ1 180 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 SLC12A8A0AV02 714 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 ASS1P00966 412 aaKnown RBP24.3■■□□□ 1.48
PTPRA-208ENST00000455631 CASP1P29466 404 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 RPS14P62263 151 aaKnown RBP24.3■■□□□ 1.48
PTPRA-208ENST00000455631 INCA1Q0VD86 236 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 DNAJC3Q13217 504 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 BAP1Q92560 729 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 CNDP2Q96KP4 475 aaKnown RBP24.3■■□□□ 1.48
PTPRA-208ENST00000455631 BLZF1Q9H2G9 400 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 FBRSQ9HAH7 460 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 USP3Q9Y6I4 520 aa24.3■■□□□ 1.48
PTPRA-208ENST00000455631 LDOC1O95751 146 aaPredicted RBP24.29■■□□□ 1.48
PTPRA-208ENST00000455631 HOXD9P28356 352 aaPredicted RBP24.29■■□□□ 1.48
PTPRA-208ENST00000455631 HLA-FP30511 346 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 ZBTB16Q05516 673 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 STK38Q15208 465 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 PRAMEF14Q5SWL7 426 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 CHST9Q7L1S5 443 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 ZNF843Q8N446 348 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 GOLGA5Q8TBA6 731 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 WFIKKN2Q8TEU8 576 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 ARID3AQ99856 593 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 ORAI3Q9BRQ5 295 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 SGK2Q9HBY8 427 aa24.29■■□□□ 1.48
PTPRA-208ENST00000455631 FAM47DPA6NHR8 397 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 CAPN9O14815 690 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 VILLO15195 856 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 CD58P19256 250 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 ABCB4P21439 1286 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 RACK1P63244 317 aaKnown RBP24.28■■□□□ 1.48
PTPRA-208ENST00000455631 TARDBPQ13148 414 aaKnown RBP eCLIP24.28■■□□□ 1.481e-12■■■■■ 41.8
PTPRA-208ENST00000455631 MPPE1Q53F39 396 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 HES3Q5TGS1 186 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 KIAA0895LQ68EN5 471 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 SV2AQ7L0J3 742 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 FAM217AQ8IXS0 508 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 LSM14AQ8ND56 463 aaKnown RBP24.28■■□□□ 1.48
PTPRA-208ENST00000455631 SLC6A18Q96N87 628 aa24.28■■□□□ 1.48
PTPRA-208ENST00000455631 ELF4Q99607 663 aaPredicted RBP24.28■■□□□ 1.48
PTPRA-208ENST00000455631 DUSP16Q9BY84 665 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms