RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 DCLK3Q9C098 648 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 RMND1Q9NWS8 449 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 ELOVL2Q9NXB9 296 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 PLXNB3Q9ULL4 1909 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 PLXNA2O75051 1894 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 ZNF217O75362 1048 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 IGLV3-27P01718 113 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 C7P10643 843 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 NCAM1P13591 858 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 LCP1P13796 627 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 CD19P15391 556 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 SLC6A4P31645 630 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 PTPRNQ16849 979 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 LCLAT1Q6UWP7 414 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 RSRC2Q7L4I2 434 aaKnown RBP16.76■□□□□ 0.27
GPC1-206ENST00000455111 ANKS1BQ7Z6G8 1248 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 ADIPOR2Q86V24 386 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 SCML4Q8N228 414 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 ZNF366Q8N895 744 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 C1orf216Q8TAB5 229 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 TOE1Q96GM8 510 aaKnown RBP16.76■□□□□ 0.27
GPC1-206ENST00000455111 CAMK1GQ96NX5 476 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 CDK5RAP1Q96SZ6 601 aaKnown RBP16.76■□□□□ 0.27
GPC1-206ENST00000455111 SCNM1Q9BWG6 230 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 GTPBP2Q9BX10 602 aaKnown RBP16.76■□□□□ 0.27
GPC1-206ENST00000455111 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 ARMCX3Q9UH62 379 aaPredicted RBP16.76■□□□□ 0.27
GPC1-206ENST00000455111 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
GPC1-206ENST00000455111 CEP295Q9C0D2 2601 aa16.76■□□□□ 0.27
GPC1-206ENST00000455111 CACNA1EQ15878 2313 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 UPK3BL1B0FP48 263 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 UPK3BL2E5RIL1 263 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 ARHGAP33O14559 1287 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 PMM2O15305 246 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 IGLV3-19P01714 112 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 PROS1P07225 676 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
GPC1-206ENST00000455111 BRD2P25440 801 aaKnown RBP16.75■□□□□ 0.27
GPC1-206ENST00000455111 CD6P30203 668 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 TPMTP51580 245 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 ZNF132P52740 706 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 LRRC63Q05C16 580 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
GPC1-206ENST00000455111 NADSYN1Q6IA69 706 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 SDE2Q6IQ49 451 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 MSANTD2Q6P1R3 559 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 CACUL1Q86Y37 369 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 TMPRSS6Q8IU80 811 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 CYB5D2Q8WUJ1 264 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 KREMEN1Q96MU8 473 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 TIGD1Q96MW7 591 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 PRDM16Q9HAZ2 1276 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 LRRC4Q9HBW1 653 aa16.75■□□□□ 0.27
GPC1-206ENST00000455111 HYAL3O43820 417 aaPredicted RBP16.74■□□□□ 0.27
GPC1-206ENST00000455111 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
GPC1-206ENST00000455111 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 UNQ6494/PRO21346Q6UXR6 183 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 RRAGAQ7L523 313 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.74■□□□□ 0.27
GPC1-206ENST00000455111 CEP76Q8TAP6 659 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 DNASE2BQ8WZ79 361 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 MYO19Q96H55 970 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 PRICKLE1Q96MT3 831 aaPredicted RBP16.74■□□□□ 0.27
GPC1-206ENST00000455111 MED15Q96RN5 788 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 TSG101Q99816 390 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 GPR174Q9BXC1 333 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 MTG2Q9H4K7 406 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 IL21RQ9HBE5 538 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 DNAAF2Q9NVR5 837 aaKnown RBP16.74■□□□□ 0.27
GPC1-206ENST00000455111 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 KLK13Q9UKR3 277 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 STRIP2Q9ULQ0 834 aa16.74■□□□□ 0.27
GPC1-206ENST00000455111 HBS1LQ9Y450 684 aaKnown RBP16.74■□□□□ 0.27
GPC1-206ENST00000455111 PTPRBP23467 1997 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 PAEPP09466 180 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 CD70P32970 193 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 RPL34P49207 117 aaKnown RBP16.73■□□□□ 0.27
GPC1-206ENST00000455111 GFPT1Q06210 699 aaPredicted RBP16.73■□□□□ 0.27
GPC1-206ENST00000455111 MORC3Q14149 939 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 MPPE1Q53F39 396 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 DHTKD1Q96HY7 919 aaPredicted RBP16.73■□□□□ 0.27
GPC1-206ENST00000455111 SLC2A11Q9BYW1 496 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 ADAM33Q9BZ11 813 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 CIPCQ9C0C6 399 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 ABCC13Q9NSE7 274 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 INTS6Q9UL03 887 aaKnown RBP16.73■□□□□ 0.27
GPC1-206ENST00000455111 PCDHB4Q9Y5E5 795 aa16.73■□□□□ 0.27
GPC1-206ENST00000455111 CAPNS1P04632 268 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 EPHX1P07099 455 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 DPP6P42658 865 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 GRIK2Q13002 908 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 CAMK2GQ13555 558 aaPredicted RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms