RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 DGKEP52429 567 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 JAM2P57087 298 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 RNASE9P60153 205 aaKnown RBP25.87■■□□□ 1.73
MSH2-203ENST00000454849 CRY1Q16526 586 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 GEN1Q17RS7 908 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 PREPLQ4J6C6 727 aaPredicted RBP25.87■■□□□ 1.73
MSH2-203ENST00000454849 ZC3H12AQ5D1E8 599 aaKnown RBP25.87■■□□□ 1.73
MSH2-203ENST00000454849 NADSYN1Q6IA69 706 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 OLFML1Q6UWY5 402 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 CEP68Q76N32 757 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 EPS8L1Q8TE68 723 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 TMA16Q96EY4 203 aaKnown RBP25.87■■□□□ 1.73
MSH2-203ENST00000454849 MYEOVQ96EZ4 313 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 FBXO10Q9UK96 956 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 SDK1Q7Z5N4 2213 aa25.87■■□□□ 1.73
MSH2-203ENST00000454849 DCLK1O15075 740 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 AXIN1O15169 862 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 ACSL4O60488 711 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 TRUB2O95900 331 aaKnown RBP25.86■■□□□ 1.73
MSH2-203ENST00000454849 SLC11A2P49281 568 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 FAM133BQ5BKY9 247 aaKnown RBP25.86■■□□□ 1.73
MSH2-203ENST00000454849 NAA35Q5VZE5 725 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 NUGGCQ68CJ6 796 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 NUDT18Q6ZVK8 323 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 PHLDB2Q86SQ0 1253 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 UNC45BQ8IWX7 931 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 CAMKK1Q8N5S9 505 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 IPO4Q8TEX9 1081 aaKnown RBP25.86■■□□□ 1.73
MSH2-203ENST00000454849 SERPINB11Q96P15 392 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 FAM204AQ9H8W3 233 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 STIM2Q9P246 746 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 NOCTQ9UK39 431 aaKnown RBP25.86■■□□□ 1.73
MSH2-203ENST00000454849 TLR6Q9Y2C9 796 aa25.86■■□□□ 1.73
MSH2-203ENST00000454849 WASH3PC4AMC7 463 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 CHRNB2P17787 502 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 HOXD9P28356 352 aaPredicted RBP25.85■■□□□ 1.73
MSH2-203ENST00000454849 SLC6A3Q01959 620 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 IQCB1Q15051 598 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 MPPE1Q53F39 396 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 EFHC1Q5JVL4 640 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 SORCS1Q8WY21 1168 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 SLC39A13Q96H72 371 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 SLC2A13Q96QE2 648 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 ERGIC2Q96RQ1 377 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 CACNA2D2Q9NY47 1150 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 NCDNQ9UBB6 729 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 STOML2Q9UJZ1 356 aa25.85■■□□□ 1.73
MSH2-203ENST00000454849 FRYLO94915 3013 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 GOLGA8SH3BPF8 625 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 GFRA2O00451 464 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 TBL1XO60907 577 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 RPP40O75818 363 aaKnown RBP25.84■■□□□ 1.73
MSH2-203ENST00000454849 STAT1P42224 750 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 CDK17Q00537 523 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 RING1Q06587 406 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 OTOGLQ3ZCN5 2332 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 EOGTQ5NDL2 527 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 BEND5Q7L4P6 421 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 ERICH1Q86X53 443 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 CHPFQ8IZ52 775 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 HMGB4Q8WW32 186 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 TRIM62Q9BVG3 475 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 NUCKS1Q9H1E3 243 aaKnown RBP25.84■■□□□ 1.73
MSH2-203ENST00000454849 CBX8Q9HC52 389 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 DDIT4Q9NX09 232 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 RAB23Q9ULC3 237 aa25.84■■□□□ 1.73
MSH2-203ENST00000454849 IRAK2O43187 625 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 HSF2BPO75031 334 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 CDH5P33151 784 aaPredicted RBP25.83■■□□□ 1.73
MSH2-203ENST00000454849 NME3Q13232 169 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 PIK3R6Q5UE93 754 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 LUZP1Q86V48 1076 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 KBTBD6Q86V97 674 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 CFAP52Q8N1V2 620 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 MDGA1Q8NFP4 955 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 SLC30A5Q8TAD4 765 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 GAB3Q8WWW8 586 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 RUBCNQ92622 972 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 C18orf8Q96DM3 657 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 NAP1L5Q96NT1 182 aaPredicted RBP25.83■■□□□ 1.73
MSH2-203ENST00000454849 RTN4Q9NQC3 1192 aaKnown RBP25.83■■□□□ 1.73
MSH2-203ENST00000454849 RAD54BQ9Y620 910 aa25.83■■□□□ 1.73
MSH2-203ENST00000454849 GVINP1Q7Z2Y8 2422 aa25.83■■□□□ 1.72
MSH2-203ENST00000454849 TCRBV21S2A2A0A5A6 115 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 LATS1O95835 1130 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 TFE3P19532 575 aaPredicted RBP25.82■■□□□ 1.72
MSH2-203ENST00000454849 NTSR1P30989 418 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 SNX16P57768 344 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 RPS24P62847 133 aaKnown RBP25.82■■□□□ 1.72
MSH2-203ENST00000454849 FMO1Q01740 532 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 CDR2Q01850 454 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 SMYD5Q6GMV2 418 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 KIAA2013Q8IYS2 634 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 PGBD3Q8N328 593 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 WFDC5Q8TCV5 224 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 RNF34Q969K3 372 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 PRICKLE1Q96MT3 831 aaPredicted RBP25.82■■□□□ 1.72
MSH2-203ENST00000454849 CIPCQ9C0C6 399 aa25.82■■□□□ 1.72
MSH2-203ENST00000454849 BCCIPQ9P287 314 aaKnown RBP eCLIP25.82■■□□□ 1.72
MSH2-203ENST00000454849 SLC27A6Q9Y2P4 619 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms