RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CDH5P33151 784 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 RASSF2P50749 326 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PDK4Q16654 411 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 CRLF3Q8IUI8 442 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 AGAP11Q8TF27 550 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 FAM136AQ96C01 138 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 WDCPQ9H6R7 721 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-213ENST00000454468 ATAD5Q96QE3 1844 aa12.35□□□□□ -0.43
SMPD4-213ENST00000454468 PMPCBO75439 489 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 OR4Q2P0C623 313 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 SLC8A1P32418 973 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 ACCSLQ4AC99 568 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 METTL23Q86XA0 190 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 IPMKQ8NFU5 416 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.431e-11■■■■■ 41.1
SMPD4-213ENST00000454468 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
SMPD4-213ENST00000454468 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 LGALS13Q9UHV8 139 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 E7ENQ6 273 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 NEMP1O14524 444 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 APOEP02649 317 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 CSH1P0DML2 217 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 CSH2P0DML3 217 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 CD52P31358 61 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 EPHB1P54762 984 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 ENPEPQ07075 957 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 ARL13BQ3SXY8 428 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 HSP90AA5PQ58FG0 334 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 DRICH1Q6PGQ1 229 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-213ENST00000454468 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 P2RY11Q96G91 374 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 BFARQ9NZS9 450 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
SMPD4-213ENST00000454468 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-213ENST00000454468 NPR3P17342 541 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 L1CAMP32004 1257 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 AQP5P55064 265 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 FAM161BQ96MY7 647 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 IRAK4Q9NWZ3 460 aa12.34□□□□□ -0.43
SMPD4-213ENST00000454468 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ERCC2P18074 760 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 TGM2P21980 687 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ACADSBP45954 432 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ATXN3P54252 364 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 CDHR3Q6ZTQ4 885 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 PDZD4Q76G19 769 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ALYREFQ86V81 257 aaKnown RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 TNS4Q8IZW8 715 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 SLC25A41Q8N5S1 370 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 CFAP73A6NFT4 308 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 NRP1O14786 923 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ENTPD5O75356 428 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ANP32DO95626 131 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 PDHA1P08559 390 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 MGAT5Q09328 741 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 STX3Q13277 289 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 MOGSQ13724 837 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ACAP1Q15027 740 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 MIB1Q86YT6 1006 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 SPATA6LQ8N4H0 392 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 POU5F2Q8N7G0 328 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 NACA2Q9H009 215 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 TKTL2Q9H0I9 626 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 C20orf96Q9NUD7 363 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 PPP1R12AO14974 1030 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 ARL1P40616 181 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-213ENST00000454468 BST1Q10588 318 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 TFAP2DQ7Z6R9 452 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 EXT2Q93063 718 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 SLC39A10Q9ULF5 831 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 NME7Q9Y5B8 376 aa12.33□□□□□ -0.44
SMPD4-213ENST00000454468 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms