RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 ZNF317Q96PQ6 595 aaPredicted RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 CCDC77Q9BR77 488 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 COLEC11Q9BWP8 271 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 MAK16Q9BXY0 300 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 LMAN2LQ9H0V9 348 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 TLR9Q9NR96 1032 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 GGA2Q9UJY4 613 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.12□□□□□ -0.63
PKP4-206ENST00000452162 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
PKP4-206ENST00000452162 HUS1O60921 280 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 CREB1P16220 341 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 GCAP28676 217 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 ACADSBP45954 432 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 CORO7P57737 925 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 SLC9A4Q6AI14 798 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 DDX53Q86TM3 631 aaKnown RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 RIBC1Q8N443 379 aaPredicted RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 PLD5Q8N7P1 536 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 B3GALNT2Q8NCR0 500 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 INTS9Q9NV88 658 aaKnown RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 NAALADL1Q9UQQ1 740 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 MYO1CO00159 1063 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 TADA2AO75478 443 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 B3GAT3O94766 335 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 EFEMP2O95967 443 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 LCP1P13796 627 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 TGM2P21980 687 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 PDIA2Q13087 525 aaKnown RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 HIF1AQ16665 826 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 ANKRD20A8PQ5CZ79 823 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 PLPP4Q5VZY2 271 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 PCDH19Q8TAB3 1148 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 MICAL1Q8TDZ2 1067 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 AUTS2Q8WXX7 1259 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 P3H4Q92791 437 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 B3GALT6Q96L58 329 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 HNRNPABQ99729 332 aaKnown RBP11.11□□□□□ -0.63
PKP4-206ENST00000452162 TCF25Q9BQ70 676 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 ZNF670Q9BS34 389 aa11.11□□□□□ -0.63
PKP4-206ENST00000452162 TCRBV7S3A2A0A539 114 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 HIDE1A8MVS5 230 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 FOXO6A8MYZ6 492 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 E7ESA3 106 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 GOLGA8MH3BSY2 632 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 SMAPO00193 183 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 GABRDO14764 452 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 BANF1O75531 89 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 TMEM63AO94886 807 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 DESP17661 470 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 ARL4CP56559 192 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 DPYSL2Q16555 572 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 HP1BP3Q5SSJ5 553 aaPredicted RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 FNBP1LQ5T0N5 605 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 FUT10Q6P4F1 479 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 DARS2Q6PI48 645 aaKnown RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 C1orf228Q6PIY5 440 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ADGRD2Q7Z7M1 963 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 MAML1Q92585 1016 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 RTP4Q96DX8 246 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 UROC1Q96N76 676 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 WDR83Q9BRX9 315 aaKnown RBP11.1□□□□□ -0.63
PKP4-206ENST00000452162 ZBP1Q9H171 429 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ENTPD7Q9NQZ7 604 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ACTL7BQ9Y614 415 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 C5orf42Q9H799 3197 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 EXOC1LA0A1B0GW35 172 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 TMEM120BA0PK00 339 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 I3L4J1 428 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 CYB561D2O14569 222 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 APOL1O14791 398 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 ATP2C2O75185 946 aa11.1□□□□□ -0.63
PKP4-206ENST00000452162 RPL9P32969 192 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms