RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 MROH9Q5TGP6 573 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 IQSEC1Q6DN90 963 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 DENND5BQ6ZUT9 1274 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 NDUFAF2Q8N183 169 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 ABHD16BQ9H3Z7 469 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 PCMTD2Q9NV79 361 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 SMIM35A0A1B0GVV1 85 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 CYB561D2O14569 222 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 BIRC5O15392 142 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 GSC2O15499 205 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 AXLP30530 894 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 ARL4AP40617 200 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 PNPLA4P41247 253 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 GRB14Q14449 540 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 MARK2Q7KZI7 788 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 DPP9Q86TI2 863 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 TTC7BQ86TV6 843 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 HACE1Q8IYU2 909 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 DEPDC1BQ8WUY9 529 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 EIF2B3Q9NR50 452 aaKnown RBP17.47■□□□□ 0.39
TOM1-210ENST00000449058 ARHGEF4Q9NR80 690 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 NR2E3Q9Y5X4 410 aa17.47■□□□□ 0.39
TOM1-210ENST00000449058 XPO1O14980 1071 aaKnown RBP17.46■□□□□ 0.39
TOM1-210ENST00000449058 SNNO75324 88 aaPredicted RBP17.46■□□□□ 0.39
TOM1-210ENST00000449058 BPGMP07738 259 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 KCNE1P15382 129 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 EPHX2P34913 555 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 CHI3L2Q15782 390 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 OTUD1Q5VV17 481 aaPredicted RBP17.46■□□□□ 0.39
TOM1-210ENST00000449058 RFWD3Q6PCD5 774 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 BNIPLQ7Z465 357 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 FAM131BQ86XD5 332 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 NUDCD3Q8IVD9 361 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 DEFB106AQ8N104 65 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 APPL2Q8NEU8 664 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 TTC8Q8TAM2 541 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 TSPAN18Q96SJ8 248 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 LGMNQ99538 433 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 TSC2P49815 1807 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 ZNF236Q9UL36 1845 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 NRCAMQ92823 1304 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 BTBD19C9JJ37 291 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 MFSD11O43934 449 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 ENTPD5O75356 428 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 CHRM1P11229 460 aaPredicted RBP17.46■□□□□ 0.39
TOM1-210ENST00000449058 NIPAL4Q0D2K0 466 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 LRRC8BQ6P9F7 803 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 ADGRF2Q8IZF7 708 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 STKLD1Q8NE28 680 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 NT5C3BQ969T7 300 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 MS4A4AQ96JQ5 239 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 NMUR2Q9GZQ4 415 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 DNAI2Q9GZS0 605 aa17.46■□□□□ 0.39
TOM1-210ENST00000449058 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 GYG2O15488 501 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 DAB1O75553 588 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 TAF6P49848 677 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 SULT1E1P49888 294 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 SOX4Q06945 474 aaPredicted RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 STXBP5Q5T5C0 1151 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 RINLQ6ZS11 566 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 COLGALT1Q8NBJ5 622 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 KCNV2Q8TDN2 545 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 TAS2R1Q9NYW7 299 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 KLK14Q9P0G3 267 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 SF3B1O75533 1304 aaKnown RBP eCLIP17.45■□□□□ 0.382e-7■■■■■ 126.8
TOM1-210ENST00000449058 MYO18AQ92614 2054 aaKnown RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 SDR42E2A6NKP2 422 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 XPOTO43592 962 aaKnown RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 OPHN1O60890 802 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 F2P00734 622 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 LMNAP02545 664 aaKnown RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 CYP2C9P11712 490 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 GLUD2P49448 558 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 DBN1Q16643 649 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 SV2CQ496J9 727 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 ALYREFQ86V81 257 aaKnown RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 UNC5BQ8IZJ1 945 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 CFAP61Q8NHU2 1237 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 TNIP3Q96KP6 325 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 HNRNPABQ99729 332 aaKnown RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 MMADHCQ9H3L0 296 aaPredicted RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 ZNF395Q9H8N7 513 aaPredicted RBP17.45■□□□□ 0.38
TOM1-210ENST00000449058 LRRC42Q9Y546 428 aa17.45■□□□□ 0.38
TOM1-210ENST00000449058 CAPN14A8MX76 684 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 RNF103O00237 685 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms