RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 FAM228BP0C875 321 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 PDGFRAP16234 1089 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 SOX9P48436 509 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 DEUP1Q05D60 604 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 SLC18A3Q16572 532 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 PREPLQ4J6C6 727 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 CCDC122Q5T0U0 273 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 CPXM2Q8N436 756 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 EMC1Q8N766 993 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 NT5C3BQ969T7 300 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 ZNF653Q96CK0 615 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 PGAP3Q96FM1 320 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 SLC39A13Q96H72 371 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 FCRL2Q96LA5 508 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 CNOT8Q9UFF9 292 aaKnown RBP13.6□□□□□ -0.23
ERGIC3-209ENST00000447986 KIF26AQ9ULI4 1882 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 OTOL1A6NHN0 477 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 ACSL4O60488 711 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 GPD1P21695 349 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 PPP2R5DQ14738 602 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 BRMS1LQ5PSV4 323 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 IER5LQ5T953 404 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 TPGS1Q6ZTW0 290 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 FBXL6Q8N531 539 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 TC2NQ8N9U0 490 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 RXFP2Q8WXD0 754 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 CFAP57Q96MR6 1250 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 P2RY13Q9BPV8 354 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 BBS2Q9BXC9 721 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 OSBPL6Q9BZF3 934 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 NHEJ1Q9H9Q4 299 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 SIT1Q9Y3P8 196 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 TTC28Q96AY4 2481 aa13.59□□□□□ -0.23
ERGIC3-209ENST00000447986 C2orf72A6NCS6 295 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 C2CD4BA6NLJ0 364 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 NEDD8-MDP1E9PL57 170 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 HOXC11O43248 304 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 MOCS2O96007 188 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 CD72P21854 359 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 RDXP35241 583 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 PTPN9P43378 593 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 CLCN5P51795 746 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 PITX1P78337 314 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 GFPT1Q06210 699 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 GRSF1Q12849 480 aaKnown RBP eCLIP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 ACBD5Q5T8D3 534 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 TMEM25Q86YD3 366 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 FAM217AQ8IXS0 508 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 JOSD2Q8TAC2 188 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 CD101Q93033 1021 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 PANX2Q96RD6 677 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 TBCBQ99426 244 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 CHP1Q99653 195 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 MARK1Q9P0L2 795 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 NDRG2Q9UN36 371 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 NCOR1O75376 2440 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
ERGIC3-209ENST00000447986 FAM170BA6NMN3 283 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 KCNU1A8MYU2 1149 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 TRDMT1O14717 391 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 TYRP14679 529 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 AOC1P19801 751 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 ATP11AP98196 1134 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 LRRC32Q14392 662 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 PON2Q15165 354 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 CDO1Q16878 200 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 ASTLQ6HA08 431 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 STRADAQ7RTN6 431 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 PJA1Q8NG27 643 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 CCDC26Q8TAB7 109 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 CTNNBL1Q8WYA6 563 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 TMA16Q96EY4 203 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 PIGVQ9NUD9 493 aa13.57□□□□□ -0.24
ERGIC3-209ENST00000447986 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms