RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MBD3L5A6NJ08 208 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 RTCAO00442 366 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 PSMA7O14818 248 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SYN3O14994 580 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 BCAT2O15382 392 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 ENTPD3O75355 529 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PDE8BO95263 885 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GGPS1O95749 300 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PLATP00750 562 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ITGB1P05556 798 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 FBLN1P23142 703 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SLC6A2P23975 617 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ICAM3P32942 547 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 MSX2P35548 267 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 PCP4P48539 62 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TOB1P50616 345 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 CLCN2P51788 898 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ZNF41P51814 821 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 ZNF131P52739 623 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 EIF3BP55884 814 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 UFM1P61960 85 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GOLGA8FQ08AF8 430 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GOLGA8DPQ0D2H9 430 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 MESP2Q0VG99 397 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 AIMP2Q13155 320 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 MRPL49Q13405 166 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 THOC5Q13769 683 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 TNFAIP1Q13829 316 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ACAP1Q15027 740 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TMEM196Q5HYL7 178 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 CERCAMQ5T4B2 595 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ANKS6Q68DC2 871 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ANKRD40Q6AI12 368 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 KLHL35Q6PF15 583 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SHQ1Q6PI26 577 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 PIK3AP1Q6ZUJ8 805 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SDCCAG8Q86SQ7 713 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 UNC45BQ8IWX7 931 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 CFAP52Q8N1V2 620 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TTLL6Q8N841 843 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 KYQ8NBH2 561 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 POGLUT1Q8NBL1 392 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PSD4Q8NDX1 1056 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TNIP2Q8NFZ5 429 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GDAP1Q8TB36 358 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 FNIP1Q8TF40 1166 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TMEM171Q8WVE6 324 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ZCCHC14Q8WYQ9 949 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 POMGNT1Q8WZA1 660 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 PGAP3Q96FM1 320 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 MASTLQ96GX5 879 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 ZBTB45Q96K62 511 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 CMTM3Q96MX0 182 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GBP5Q96PP8 586 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SPAG5Q96R06 1193 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TRIB1Q96RU8 372 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PAAF1Q9BRP4 392 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 C11orf84Q9BUA3 381 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 HTATIP2Q9BUP3 242 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TLR10Q9BXR5 811 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SLC6A17Q9H1V8 727 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 OR10A2Q9H208 303 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 SH2D4AQ9H788 454 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 CXorf36Q9H7Y0 433 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TRPV4Q9HBA0 871 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 GBA2Q9HCG7 927 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 DECR2Q9NUI1 292 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 WDR35Q9P2L0 1181 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 EIF2B4Q9UI10 523 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 RAB21Q9UL25 225 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TRPC5Q9UL62 973 aaPredicted RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 ODF2LQ9ULJ1 636 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PA2G4Q9UQ80 394 aaKnown RBP4.11□□□□□ -1.75
PMS1-216ENST00000447734 NEU2Q9Y3R4 380 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 PCDHA10Q9Y5I2 948 aa4.11□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3DA0A087WVF3 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3IA0A087WXS9 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3EA0A087X179 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3KA0A087X1G2 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 LOC105369274A0A096LPK9 316 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 LOC102723532A0A0G2JNH3 316 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 FAM237BA0A1B0GVD1 139 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3BA6NDS4 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3FA6NER0 549 aaPredicted RBP4.1□□□□□ -1.75
PMS1-216ENST00000447734 C16orf96A6NNT2 1141 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 A8MXE2 369 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TBC1D3LB9A6J9 549 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 GCOM1H8Y6P7 765 aaPredicted RBP4.1□□□□□ -1.75
PMS1-216ENST00000447734 M0QYT0 321 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TP73O15350 636 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 TRIM13O60858 407 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 CBFA2T3O75081 653 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 GOSR1O95249 250 aa4.1□□□□□ -1.75
PMS1-216ENST00000447734 MT-ND3P03897 115 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms