RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TRIM65Q6PJ69 517 aa21.63■■□□□ 1.05
SDC1-205ENST00000447124 TMA16Q96EY4 203 aaKnown RBP21.63■■□□□ 1.05
SDC1-205ENST00000447124 EDEM2Q9BV94 578 aa21.63■■□□□ 1.05
SDC1-205ENST00000447124 LSM14BQ9BX40 385 aaKnown RBP21.63■■□□□ 1.05
SDC1-205ENST00000447124 SLC4A5Q9BY07 1137 aa21.63■■□□□ 1.05
SDC1-205ENST00000447124 PI4KAP42356 2102 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 C4orf47A7E2U8 309 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 CDX4O14627 284 aaPredicted RBP21.62■■□□□ 1.05
SDC1-205ENST00000447124 FBXO21O94952 628 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 LETM1O95202 739 aaPredicted RBP21.62■■□□□ 1.05
SDC1-205ENST00000447124 ADRB1P08588 477 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 ITPKAP23677 461 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 ZNF234Q14588 700 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 FUT11Q495W5 492 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 ANKS1BQ7Z6G8 1248 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 MLKLQ8NB16 471 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 CLSTN2Q9H4D0 955 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 CYP8B1Q9UNU6 501 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 NAALADL1Q9UQQ1 740 aa21.62■■□□□ 1.05
SDC1-205ENST00000447124 PLXND1Q9Y4D7 1925 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 LATS1O95835 1130 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 HLA-FP30511 346 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 SLC6A4P31645 630 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 TBX4P57082 545 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 RPL6Q02878 288 aaKnown RBP21.61■■□□□ 1.05
SDC1-205ENST00000447124 PIK3R6Q5UE93 754 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 RFWD3Q6PCD5 774 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 SLC36A4Q6YBV0 504 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 SYT12Q8IV01 421 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 WDTC1Q8N5D0 677 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 DQX1Q8TE96 717 aaKnown RBP21.61■■□□□ 1.05
SDC1-205ENST00000447124 STK32AQ8WU08 396 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 UCMAQ8WVF2 138 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 MYEOVQ96EZ4 313 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 MKRN2Q9H000 416 aaKnown RBP21.61■■□□□ 1.05
SDC1-205ENST00000447124 ST7Q9NRC1 585 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 AJAP1Q9UKB5 411 aaPredicted RBP21.61■■□□□ 1.05
SDC1-205ENST00000447124 PILRBQ9UKJ0 227 aa21.61■■□□□ 1.05
SDC1-205ENST00000447124 ZBTB24O43167 697 aaPredicted RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 PAPSS1O43252 624 aaPredicted RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 ACSL4O60488 711 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 ZNF217O75362 1048 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 NCAM1P13591 858 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 PON1P27169 355 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 ARHGAP44Q17R89 818 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 FAM133BQ5BKY9 247 aaKnown RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 SYPL2Q5VXT5 272 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 LYSMD4Q5XG99 296 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 NADSYN1Q6IA69 706 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 GBP6Q6ZN66 633 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 ENOSF1Q7L5Y1 443 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 KIAA0907Q7Z7F0 614 aaPredicted RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 TMEM110Q86TL2 294 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 SLC41A1Q8IVJ1 513 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 WFDC5Q8TCV5 224 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 DDX1Q92499 740 aaKnown RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 FCRL2Q96LA5 508 aaPredicted RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 CIPCQ9C0C6 399 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 SIX2Q9NPC8 291 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 TJP2Q9UDY2 1190 aa21.6■■□□□ 1.05
SDC1-205ENST00000447124 EVLQ9UI08 416 aaPredicted RBP21.6■■□□□ 1.05
SDC1-205ENST00000447124 ATXN2Q99700 1313 aaKnown RBP21.59■■□□□ 1.05
SDC1-205ENST00000447124 NPC1O15118 1278 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 AP5Z1O43299 807 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 TIMM44O43615 452 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 PRKCHP24723 683 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 RING1Q06587 406 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 ZNF33AQ06730 810 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 TRIM61Q5EBN2 209 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 N4BP2L1Q5TBK1 243 aaPredicted RBP21.59■■□□□ 1.05
SDC1-205ENST00000447124 PEAR1Q5VY43 1037 aaPredicted RBP21.59■■□□□ 1.05
SDC1-205ENST00000447124 DPY19L2P1Q6NXN4 242 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 KIAA1324Q6UXG2 1013 aaKnown RBP21.59■■□□□ 1.05
SDC1-205ENST00000447124 METTL3Q86U44 580 aaKnown RBP21.59■■□□□ 1.05
SDC1-205ENST00000447124 ADIPOR2Q86V24 386 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 UNC45BQ8IWX7 931 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 ADAM32Q8TC27 787 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 AZIN2Q96A70 460 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 SLC39A13Q96H72 371 aa21.59■■□□□ 1.05
SDC1-205ENST00000447124 ASCC3Q8N3C0 2202 aaKnown RBP21.58■■□□□ 1.05
SDC1-205ENST00000447124 GTPBP10A4D1E9 387 aaKnown RBP21.58■■□□□ 1.05
SDC1-205ENST00000447124 E5RJQ4 531 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 THAP12O43422 761 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 MED7O43513 233 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 GNA15P30679 374 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 USP8P40818 1118 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 ACADSBP45954 432 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 MTIF2P46199 727 aaKnown RBP21.58■■□□□ 1.05
SDC1-205ENST00000447124 ZNF445P59923 1031 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 EIF4HQ15056 248 aaKnown RBP21.58■■□□□ 1.05
SDC1-205ENST00000447124 MEA1Q16626 185 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 EXOC3L4Q17RC7 722 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 NUGGCQ68CJ6 796 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 SLC23A3Q6PIS1 610 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 TMPRSS6Q8IU80 811 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.58■■□□□ 1.05
SDC1-205ENST00000447124 CYB5D2Q8WUJ1 264 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 SHC3Q92529 594 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 GOLGA1Q92805 767 aa21.58■■□□□ 1.05
SDC1-205ENST00000447124 FAM149B1Q96BN6 582 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms