RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 NUGGCQ68CJ6 796 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 NADSYN1Q6IA69 706 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 CAVIN1Q6NZI2 390 aaKnown RBP15.35■□□□□ 0.05
USE1-202ENST00000445667 FAM183BPQ6ZVS7 135 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 CHPFQ8IZ52 775 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 AOPEPQ8N6M6 819 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 HMGB4Q8WW32 186 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 RLN3Q8WXF3 142 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 SLC39A13Q96H72 371 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 SERPINB11Q96P15 392 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 NOX5Q96PH1 765 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 HSD3B7Q9H2F3 369 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 PDCL3Q9H2J4 239 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 PARD6AQ9NPB6 346 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 FAM207AQ9NSI2 230 aaPredicted RBP15.35■□□□□ 0.05
USE1-202ENST00000445667 CACNA2D2Q9NY47 1150 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 BCCIPQ9P287 314 aaKnown RBP eCLIP15.35■□□□□ 0.05
USE1-202ENST00000445667 LIMA1Q9UHB6 759 aaKnown RBP15.35■□□□□ 0.05
USE1-202ENST00000445667 USP18Q9UMW8 372 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 TLR6Q9Y2C9 796 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 WDR87Q6ZQQ6 2873 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 FAM186AA6NE01 2351 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 GPR179Q6PRD1 2367 aa15.35■□□□□ 0.05
USE1-202ENST00000445667 F8VZ95 297 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 TRUB2O95900 331 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 MOCS2O96007 188 aaPredicted RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 HOXB2P14652 356 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 PLK5Q496M5 336 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 PTPN20Q4JDL3 420 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 DCAF6Q58WW2 860 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 FAM133BQ5BKY9 247 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 ZC3H12AQ5D1E8 599 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 PIK3R6Q5UE93 754 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 SDE2Q6IQ49 451 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 NOP9Q86U38 636 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 DEFB106AQ8N104 65 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 PGBD3Q8N328 593 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 ANKRD20A12PQ8NF67 263 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 DDX1Q92499 740 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 TRIM62Q9BVG3 475 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 SLC2A11Q9BYW1 496 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 DUSP15Q9H1R2 295 aaPredicted RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 XPO7Q9UIA9 1087 aaKnown RBP15.34■□□□□ 0.05
USE1-202ENST00000445667 SIK3Q9Y2K2 1263 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 CEP83Q9Y592 693 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 RAD54BQ9Y620 910 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 EML5Q05BV3 1969 aa15.34■□□□□ 0.05
USE1-202ENST00000445667 OTOGLQ3ZCN5 2332 aa15.33■□□□□ 0.05
USE1-202ENST00000445667 SYNJ2BP-COX16A0A087WUM0 186 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 A0A1W2PQF6 199 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 TBL1XO60907 577 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 GFPT2O94808 682 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 ZNF18P17022 549 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 BCKDHBP21953 392 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 GBP1P32455 592 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 ZNF445P59923 1031 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 SLC6A3Q01959 620 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 NNTQ13423 1086 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 SYCP1Q15431 976 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 CCDC6Q16204 474 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 TMEM215Q68D42 235 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 KIAA1211LQ6NV74 962 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 ANKS1BQ7Z6G8 1248 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 TMEM35BQ8NCS4 154 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 IPO4Q8TEX9 1081 aaKnown RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 SORCS1Q8WY21 1168 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 AZIN2Q96A70 460 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 MYEOVQ96EZ4 313 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 ZC3H10Q96K80 434 aaKnown RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 SLC2A13Q96QE2 648 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 GABRG3Q99928 467 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 NUCKS1Q9H1E3 243 aaKnown RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 ARRDC1-AS1Q9H2J1 176 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 SYNCQ9H7C4 482 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 ELOVL2Q9NXB9 296 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 COX16Q9P0S2 106 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 STIM2Q9P246 746 aa15.33■□□□□ 0.04
USE1-202ENST00000445667 EP300Q09472 2414 aaPredicted RBP15.33■□□□□ 0.04
USE1-202ENST00000445667 LRRC10BA6NIK2 292 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 IRAK2O43187 625 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 IGLV3-25P01717 112 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 GLI1P08151 1106 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 MMEP08473 750 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 GABRG2P18507 467 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 HLA-FP30511 346 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 SNX16P57768 344 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 CDK17Q00537 523 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 UBXN1Q04323 297 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 C2CD6Q53TS8 623 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 OLFML1Q6UWY5 402 aa15.32■□□□□ 0.04
USE1-202ENST00000445667 GPR161Q8N6U8 529 aaKnown RBP15.32■□□□□ 0.04
USE1-202ENST00000445667 OLIG1Q8TAK6 271 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms