RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TRMT1Q9NXH9 659 aaKnown RBP17.92■□□□□ 0.46
LIME1-202ENST00000444951 GUCA1BQ9UMX6 200 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 PAXBP1Q9Y5B6 917 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 CPQQ9Y646 472 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 DENND4CQ5VZ89 1909 aa17.92■□□□□ 0.46
LIME1-202ENST00000444951 DNAH14Q0VDD8 3507 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 KANSL1LA0AUZ9 987 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 MYO1FO00160 1098 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 SCAMP3O14828 347 aaKnown RBP17.91■□□□□ 0.46
LIME1-202ENST00000444951 PJA2O43164 708 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 CCP110O43303 1012 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 GBP1P32455 592 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 ZNF143P52747 638 aaPredicted RBP17.91■□□□□ 0.46
LIME1-202ENST00000444951 DEUP1Q05D60 604 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 MESDQ14696 234 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 FAM78AQ5JUQ0 283 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 MSANTD2Q6P1R3 559 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 BEND5Q7L4P6 421 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 ARID3BQ8IVW6 561 aaPredicted RBP17.91■□□□□ 0.46
LIME1-202ENST00000444951 FAM172AQ8WUF8 416 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 NPY6RQ99463 290 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 CNPY3Q9BT09 278 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 ADAM33Q9BZ11 813 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 CCL26Q9Y258 94 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 COL4A2P08572 1712 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 F5P12259 2224 aa17.91■□□□□ 0.46
LIME1-202ENST00000444951 ECI2O75521 394 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 PRAMEF12O95522 483 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 DESP17661 470 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
LIME1-202ENST00000444951 ATXN1P54253 815 aaKnown RBP17.9■□□□□ 0.46
LIME1-202ENST00000444951 TBX4P57082 545 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 ZNF252P-AS1Q0IIN9 211 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 GRM2Q14416 872 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 UBXN2BQ14CS0 331 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 ARHGAP29Q52LW3 1261 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 OTUD1Q5VV17 481 aaPredicted RBP17.9■□□□□ 0.46
LIME1-202ENST00000444951 DAB2IPQ5VWQ8 1189 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 ARCQ7LC44 396 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 SHDQ96IW2 340 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 SERPINB11Q96P15 392 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 TSGA10Q9BZW7 698 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 CALCOCO1Q9P1Z2 691 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 IP6K2Q9UHH9 426 aa17.9■□□□□ 0.46
LIME1-202ENST00000444951 A0A0A6YYK5 440 aaPredicted RBP17.89■□□□□ 0.45
LIME1-202ENST00000444951 FAM170BA6NMN3 283 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 DPYSL4O14531 572 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 ZSCAN12O43309 604 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 KRT86O43790 486 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 MOCS3O95396 460 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 OLFM2O95897 454 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 TARSP26639 723 aaKnown RBP17.89■□□□□ 0.45
LIME1-202ENST00000444951 VIPR2P41587 438 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 ARHGAP25P42331 645 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 PTPN9P43378 593 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 SLC7A9P82251 487 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 PRKCQQ04759 706 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 SCYL2Q6P3W7 929 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 KLHDC10Q6PID8 442 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 TPRG1Q6ZUI0 275 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.45
LIME1-202ENST00000444951 CPNE8Q86YQ8 564 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 ZNF276Q8N554 614 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 SH3RF2Q8TEC5 729 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 SMARCD2Q92925 531 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 USP13Q92995 863 aaPredicted RBP17.89■□□□□ 0.45
LIME1-202ENST00000444951 WBP2Q969T9 261 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
LIME1-202ENST00000444951 LTB4R2Q9NPC1 389 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 HEBP1Q9NRV9 189 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 PIGVQ9NUD9 493 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 TDP1Q9NUW8 608 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 CFAP97Q9P2B7 532 aa17.89■□□□□ 0.45
LIME1-202ENST00000444951 LEFTY2O00292 366 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 IRAK2O43187 625 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 MTA2O94776 668 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 MOCS2O96007 188 aaPredicted RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 PFKLP17858 780 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 RDXP35241 583 aaKnown RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 COG7P83436 770 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 ZXDBP98169 803 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 PFKPQ01813 784 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 TRIP4Q15650 581 aaPredicted RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 C17orf53Q8N3J3 647 aaPredicted RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 NT5C3BQ969T7 300 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 ELSPBP1Q96BH3 223 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 ZFRQ96KR1 1074 aaKnown RBP17.88■□□□□ 0.45
LIME1-202ENST00000444951 ASB16Q96NS5 453 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 GOLPH3Q9H4A6 298 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 PCSK1NQ9UHG2 260 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 ZMYM5Q9UJ78 669 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 HYOU1Q9Y4L1 999 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 TICRRQ7Z2Z1 1910 aa17.88■□□□□ 0.45
LIME1-202ENST00000444951 USP27XA6NNY8 438 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms