RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 NOMO3P69849 1222 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ARCQ7LC44 396 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 SZRD1Q7Z422 152 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 CCDC60Q8IWA6 550 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 GPAMQ9HCL2 828 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 NMRK1Q9NWW6 199 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 RENBPP51606 427 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 MSLNQ13421 630 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ZACNQ401N2 412 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 BBS12Q6ZW61 710 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 PLD3Q8IV08 490 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 IQCKQ8N0W5 287 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 WWOXQ9NZC7 414 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 CRLS1Q9UJA2 301 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 SLIT2O94813 1529 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 F8VP50 259 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ATP9AO75110 1047 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 UNC5CO95185 931 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 MYL4P12829 197 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 JAM2P57087 298 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ZNF572Q7Z3I7 529 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 IFNEQ86WN2 208 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 BLOC1S5Q8TDH9 187 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 FBXO32Q969P5 355 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 FBXO44Q9H4M3 255 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 FAM124BQ9H5Z6 455 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 DDX43Q9NXZ2 648 aaKnown RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 TSR3Q9UJK0 312 aaKnown RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 SKAP2O75563 359 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-203ENST00000441123 ERFP50548 548 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 NUP107P57740 925 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 NMRAL1Q9HBL8 299 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 EFR3BQ9Y2G0 817 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
BRPF3-203ENST00000441123 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 TMEM114B3SHH9 223 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 RNF103O00237 685 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 PLSCR1O15162 318 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 BIRC5O15392 142 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 WFS1O76024 890 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 MGAT1P26572 445 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 CCDC15Q0P6D6 951 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 RRM2BQ7LG56 351 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 DLG3Q92796 817 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 SGF29Q96ES7 293 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 ZNF670Q9BS34 389 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 SPATA31C2B4DYI2 1134 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 B3GAT3O94766 335 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 S100A5P33763 92 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 SKIV2LQ15477 1246 aaKnown RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 NET1Q7Z628 596 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 MYO1HQ8N1T3 1032 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 KAT5Q92993 513 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 ADGRE3Q9BY15 652 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
BRPF3-203ENST00000441123 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 PRRG1O14668 218 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 TRIM69Q86WT6 500 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 SERPINB11Q96P15 392 aa13.21□□□□□ -0.29
BRPF3-203ENST00000441123 A0A0A0MRY4 1105 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 E9PBE3 544 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 KLHL41O60662 606 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 SHOX2O60902 331 aaPredicted RBP13.21□□□□□ -0.3
BRPF3-203ENST00000441123 PTPRAP18433 802 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.3
BRPF3-203ENST00000441123 ADIGQ0VDE8 80 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 PTP4A2Q12974 167 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 MAD2L1Q13257 205 aaPredicted RBP13.21□□□□□ -0.3
BRPF3-203ENST00000441123 TAF2Q6P1X5 1199 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 HSFY1Q96LI6 401 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 SPATA13Q96N96 652 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 ACO2Q99798 780 aaKnown RBP13.21□□□□□ -0.3
BRPF3-203ENST00000441123 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 MTFR1LQ9H019 292 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 TMEM150BA6NC51 233 aa13.21□□□□□ -0.3
BRPF3-203ENST00000441123 SPDYE5A6NIY4 337 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms