RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SGSHP51688 502 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 UBXN1Q04323 297 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 RING1Q06587 406 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 PTPN20Q4JDL3 420 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 DCAF6Q58WW2 860 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 EFHC1Q5JVL4 640 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 SMYD5Q6GMV2 418 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 BEND5Q7L4P6 421 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 TRMT11Q7Z4G4 463 aaKnown RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 NOP9Q86U38 636 aaKnown RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 KBTBD6Q86V97 674 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 RASSF3Q86WH2 238 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 CHPFQ8IZ52 775 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 DEFB106AQ8N104 65 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 FAM160A2Q8N612 972 aaPredicted RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 TMEM35BQ8NCS4 154 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 MDGA1Q8NFP4 955 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
LTBR-202ENST00000440421 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
LTBR-202ENST00000440421 STOML2Q9UJZ1 356 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 TLR6Q9Y2C9 796 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 SIK3Q9Y2K2 1263 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 SLC27A6Q9Y2P4 619 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 STARD13Q9Y3M8 1113 aa14.29□□□□□ -0.12
LTBR-202ENST00000440421 SYNJ2BP-COX16A0A087WUM0 186 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 FAM186AA6NE01 2351 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 TRUB2O95900 331 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 MMEP08473 750 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 NTSR1P30989 418 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 SNX16P57768 344 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 ZNF445P59923 1031 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 FAM133BQ5BKY9 247 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 RIF1Q5UIP0 2472 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 NADSYN1Q6IA69 706 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 SDE2Q6IQ49 451 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 CACNA2D4Q7Z3S7 1137 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 ANKS1BQ7Z6G8 1248 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 DDX1Q92499 740 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 SLC39A13Q96H72 371 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 FAM204AQ9H8W3 233 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 CACNA2D2Q9NY47 1150 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 COX16Q9P0S2 106 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 STIM2Q9P246 746 aa14.28□□□□□ -0.12
LTBR-202ENST00000440421 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
LTBR-202ENST00000440421 WASH3PC4AMC7 463 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 GFRA2O00451 464 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 IRAK2O43187 625 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 TBL1XO60907 577 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 HSF2BPO75031 334 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 APOEP02649 317 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 RETP07949 1114 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 GLI1P08151 1106 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 GBP1P32455 592 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SOX5P35711 763 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 CDK17Q00537 523 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SLC6A3Q01959 620 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 NNTQ13423 1086 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 USP39Q53GS9 565 aaKnown RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 C2CD6Q53TS8 623 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 PIK3R6Q5UE93 754 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 APTXQ7Z2E3 356 aaKnown RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 RLN3Q8WXF3 142 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 MYEOVQ96EZ4 313 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SLC2A13Q96QE2 648 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 SPAG5Q96R06 1193 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 DDX50Q9BQ39 737 aaKnown RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 CIPCQ9C0C6 399 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 ASNSD1Q9NWL6 643 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 USP18Q9UMW8 372 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.13
LTBR-202ENST00000440421 PTPRZ1P23471 2315 aaPredicted RBP14.27□□□□□ -0.13
LTBR-202ENST00000440421 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 MYO18AQ92614 2054 aaKnown RBP14.26□□□□□ -0.13
LTBR-202ENST00000440421 A0A1W2PQF6 199 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 SYCE3A1L190 88 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 LRRC10BA6NIK2 292 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 SMTNL1A8MU46 457 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 IGLV3-25P01717 112 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 HLA-FP30511 346 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 CDH5P33151 784 aaPredicted RBP14.26□□□□□ -0.13
LTBR-202ENST00000440421 ZNF165P49910 485 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 JAM2P57087 298 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
LTBR-202ENST00000440421 NAA35Q5VZE5 725 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 KIAA1211LQ6NV74 962 aa14.26□□□□□ -0.13
LTBR-202ENST00000440421 ERICH1Q86X53 443 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms