RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 DIS3LQ8TF46 1054 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 MZB1Q8WU39 189 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 COG4Q9H9E3 785 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CDY2AQ9Y6F7 541 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CDY1Q9Y6F8 540 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ARHGEF37A1IGU5 675 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 GPC4O75487 556 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 LYPLA2O95372 231 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 PRKCBP05771 671 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TFE3P19532 575 aaPredicted RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 ITGAXP20702 1163 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 AVPR1AP37288 418 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 HSD17B4P51659 736 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 ABCE1P61221 599 aaKnown RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SLC25A11Q02978 314 aaKnown RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 IFRD2Q12894 506 aaPredicted RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 GK3PQ14409 553 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 NOMO1Q15155 1222 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SLC44A4Q53GD3 710 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TAS1R3Q7RTX0 852 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 PID1Q7Z2X4 250 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 PCDH20Q8N6Y1 951 aaKnown RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 KYQ8NBH2 561 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 RCN3Q96D15 328 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 HSPBAP1Q96EW2 488 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 FRMD8P1Q9BZ68 369 aaPredicted RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 ZNF518BQ9C0D4 1074 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 FAM96AQ9H5X1 160 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TASP1Q9H6P5 420 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 POPDC2Q9HBU9 364 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 NRBP2Q9NSY0 501 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 KLHL8Q9P2G9 620 aaPredicted RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 AURKCQ9UQB9 309 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SLC15A5A6NIM6 579 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SDR42E2A6NKP2 422 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 KPNA7A9QM74 516 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 H3BSA7 217 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 STX16-NPEPL1H3BU86 382 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 GIPC1O14908 333 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 NOL3O60936 208 aaKnown RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 MICAL2O94851 1124 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 CRTAMO95727 393 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 CXCL8P10145 99 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 CRHR1P34998 444 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 KLF10Q13118 480 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 FBXL19Q6PCT2 694 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 C16orf89Q6UX73 402 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 PGLYRP2Q96PD5 576 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 RNF157Q96PX1 679 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 EBNA1BP2Q99848 306 aaKnown RBP9.31□□□□□ -0.92
COPB1-202ENST00000439561 HAUS8Q9BT25 410 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 CAB39LQ9H9S4 337 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SLC38A10Q9HBR0 1119 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 TMEM216Q9P0N5 145 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 SIRPGQ9P1W8 387 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 ARHGAP28Q9P2N2 729 aa9.31□□□□□ -0.92
COPB1-202ENST00000439561 E7ESA3 106 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 METTL18O95568 372 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 THRAP10827 490 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ARL4AP40617 200 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 INHBCP55103 352 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 GBE1Q04446 702 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 MSLNQ13421 630 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 LRRC8EQ6NSJ5 796 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 KCNT2Q6UVM3 1135 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 KYAT3Q6YP21 454 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 ARCQ7LC44 396 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 WDTC1Q8N5D0 677 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ZNF781Q8N8C0 355 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 FAM151AQ8WW52 585 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 CLEC4DQ8WXI8 215 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 TMEM79Q9BSE2 394 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 CNPY3Q9BT09 278 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 DHRS4Q9BTZ2 278 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ARHGEF38Q9NXL2 777 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 PTTG2Q9NZH5 202 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 SLC39A10Q9ULF5 831 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 PSMD13Q9UNM6 376 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 TRDMT1O14717 391 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 KLF11O14901 512 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 RGL2O15211 777 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 P4HA1P13674 534 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 AOC1P19801 751 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 CYP2F1P24903 491 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 GRK2P25098 689 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 NAMPTP43490 491 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 TGFB2P61812 414 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 TTLL12Q14166 644 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 TEDDM1Q5T9Z0 273 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms