RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 HOXC11O43248 304 aaPredicted RBP16.78■□□□□ 0.28
SNRPB-202ENST00000438552 AKR1B10O60218 316 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 LATS1O95835 1130 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 GLULP15104 373 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 GPD1P21695 349 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
SNRPB-202ENST00000438552 SDC4P31431 198 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 SLC11A2P49281 568 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 NR1H3Q13133 447 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 MAMLD1Q13495 774 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 UBXN2BQ14CS0 331 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PON2Q15165 354 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 ANO4Q32M45 955 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 CCDC14Q49A88 953 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 FAM133BQ5BKY9 247 aaKnown RBP16.78■□□□□ 0.28
SNRPB-202ENST00000438552 NADSYN1Q6IA69 706 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 ZNF852Q6ZMS4 543 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 C12orf40Q86WS4 652 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 FAM3CQ92520 227 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PBXIP1Q96AQ6 731 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PGAP3Q96FM1 320 aaPredicted RBP16.78■□□□□ 0.28
SNRPB-202ENST00000438552 MSANTD3Q96H12 275 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PANX2Q96RD6 677 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 THAP2Q9H0W7 228 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 LTB4R2Q9NPC1 389 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 PARVAQ9NVD7 372 aa16.78■□□□□ 0.28
SNRPB-202ENST00000438552 F5P12259 2224 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 KANSL1LA0AUZ9 987 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 ANKRD62A6NC57 917 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 MAN2B1O00754 1011 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 CCP110O43303 1012 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 ACSL4O60488 711 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 TSPAN3O60637 253 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 MYBL1P10243 752 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 SLC6A4P31645 630 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 CCR1P32246 355 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.28
SNRPB-202ENST00000438552 CHKAP35790 457 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 OPRD1P41143 372 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 PTPN9P43378 593 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 SGSHP51688 502 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 MLLT6P55198 1093 aaPredicted RBP16.77■□□□□ 0.28
SNRPB-202ENST00000438552 OGDHQ02218 1023 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 GAD2Q05329 585 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 ADGRF1Q5T601 910 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 SH3PXD2AQ5TCZ1 1133 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 BNIPLQ7Z465 357 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 CPXM2Q8N436 756 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 ATP6V0D2Q8N8Y2 350 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 ARHGEF26Q96DR7 871 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 PRICKLE1Q96MT3 831 aaPredicted RBP16.77■□□□□ 0.28
SNRPB-202ENST00000438552 BBS2Q9BXC9 721 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 PACSIN1Q9BY11 444 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 TRIM7Q9C029 511 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNRPB-202ENST00000438552 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 STOML2Q9UJZ1 356 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 MTF2Q9Y483 593 aaPredicted RBP16.77■□□□□ 0.28
SNRPB-202ENST00000438552 SCINQ9Y6U3 715 aa16.77■□□□□ 0.28
SNRPB-202ENST00000438552 TYRP14679 529 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 GGCXP38435 758 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 CXCR3P49682 368 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 GALCP54803 685 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 KDSRQ06136 332 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 PPP2R5DQ14738 602 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM31Q5JXX7 168 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 RAP1GAP2Q684P5 730 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 SND1Q7KZF4 910 aaKnown RBP eCLIP16.76■□□□□ 0.273e-15■□□□□ 9.1
SNRPB-202ENST00000438552 FAM131BQ86XD5 332 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 CCDC105Q8IYK2 499 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 NAT16Q8N8M0 369 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 FAM172AQ8WUF8 416 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 MYEOVQ96EZ4 313 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 BTN2A3PQ96KV6 586 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 C1QTNF1Q9BXJ1 281 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 ANLNQ9NQW6 1124 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 TMPRSS4Q9NRS4 437 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 IMPACTQ9P2X3 320 aa16.76■□□□□ 0.27
SNRPB-202ENST00000438552 KCNU1A8MYU2 1149 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 PRR33A8MZF0 331 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 I6L893 689 aaPredicted RBP16.75■□□□□ 0.27
SNRPB-202ENST00000438552 GFRA2O00451 464 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 GPR37L1O60883 481 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 F9P00740 461 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 PENKP01210 267 aaPredicted RBP16.75■□□□□ 0.27
SNRPB-202ENST00000438552 SLC2A3P11169 496 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 FECHP22830 423 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 SLC6A11P48066 632 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 ZNF143P52747 638 aaPredicted RBP16.75■□□□□ 0.27
SNRPB-202ENST00000438552 ZNF252P-AS1Q0IIN9 211 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 MESP2Q0VG99 397 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 PIK3R6Q5UE93 754 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 FYB2Q5VWT5 728 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms