RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 KRT39Q6A163 491 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 UNQ6494/PRO21346Q6UXR6 183 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 Q6ZVU0 165 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GPRIN1Q7Z2K8 1008 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 CCDC186Q7Z3E2 898 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 ZMIZ2Q8NF64 920 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 IPO4Q8TEX9 1081 aaKnown RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 TMEM174Q8WUU8 243 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 ERLEC1Q96DZ1 483 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 HSPA12BQ96MM6 686 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 IPO9Q96P70 1041 aaKnown RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 TSG101Q99816 390 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 SCAND2PQ9GZW5 306 aaPredicted RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 FAM124BQ9H5Z6 455 aaPredicted RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 TMEM8AQ9HCN3 771 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS50-204ENST00000438395 CACNA2D2Q9NY47 1150 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 CLIC5Q9NZA1 410 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 MBD1Q9UIS9 605 aaPredicted RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 MAPK8IP1Q9UQF2 711 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 DENND4CQ5VZ89 1909 aa8.15□□□□□ -1.11
VPS50-204ENST00000438395 ATRXP46100 2492 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 HELZP42694 1942 aaKnown RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 TMEM8BA6NDV4 472 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 GOLGA6L4A6NEF3 574 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ANTXRLA6NF34 631 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 GFRA2O00451 464 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 NPC1O15118 1278 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 MDM4O15151 490 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 TRIM24O15164 1050 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 CETN3O15182 167 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 STC2O76061 302 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 BEST1O76090 585 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PROS1P07225 676 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 SERPINF2P08697 491 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ACADMP11310 421 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 CORO1AP31146 461 aaKnown RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 NDUFA8P51970 172 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 KIF11P52732 1056 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 YWHAEP62258 255 aaKnown RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 ZNF33AQ06730 810 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ENPEPQ07075 957 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PKP1Q13835 747 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PLEKHG6Q3KR16 790 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 DCAF17Q5H9S7 520 aaPredicted RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ANKS1BQ7Z6G8 1248 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 GUF1Q8N442 669 aaKnown RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 DEFB119Q8N690 84 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 FRMD1Q8N878 549 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 TRIML1Q8N9V2 468 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 FBXL13Q8NEE6 735 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 RNF139Q8WU17 664 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 TWNKQ96RR1 684 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 DUSP16Q9BY84 665 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 CIPCQ9C0C6 399 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 ZNF395Q9H8N7 513 aaPredicted RBP8.14□□□□□ -1.11
VPS50-204ENST00000438395 NMUR1Q9HB89 426 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 RMND1Q9NWS8 449 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PLK2Q9NYY3 685 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 MARCH2Q9P0N8 246 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 HESX1Q9UBX0 185 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PILRBQ9UKJ0 227 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 STARD13Q9Y3M8 1113 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 LAMA1P25391 3075 aa8.14□□□□□ -1.11
VPS50-204ENST00000438395 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 IGHV1OR15-9A0A0B4J2B8 117 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 A0A1W2PQD8 194 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 A0A1W2PQF6 199 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 H0Y626 953 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 CDX4O14627 284 aaPredicted RBP8.13□□□□□ -1.11
VPS50-204ENST00000438395 TRIM16O95361 564 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 CD19P15391 556 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 CD6P30203 668 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 HARS2P49590 506 aaKnown RBP8.13□□□□□ -1.11
VPS50-204ENST00000438395 PGFP49763 221 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 ZNF132P52740 706 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 BCAT1P54687 386 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 YWHAGP61981 247 aaKnown RBP eCLIP8.13□□□□□ -1.11
VPS50-204ENST00000438395 PPP3CAQ08209 521 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 HNRNPDQ14103 355 aaKnown RBP8.13□□□□□ -1.11
VPS50-204ENST00000438395 EIF4HQ15056 248 aaKnown RBP8.13□□□□□ -1.11
VPS50-204ENST00000438395 NFIL3Q16649 462 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 EDRF1Q3B7T1 1238 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 SERPINA13PQ6UXR4 307 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 KRBA2Q6ZNG9 492 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 TOGARAM2Q6ZUX3 1019 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 DENND1CQ8IV53 801 aa8.13□□□□□ -1.11
VPS50-204ENST00000438395 ABCA7Q8IZY2 2146 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms