RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MGEA5O60502 916 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 LPXNO60711 386 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 BGNP21810 368 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 CLCNKBP51801 687 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 SESN2P58004 480 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 BNIP1Q12981 228 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 MTA1Q13330 715 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ITGA7Q13683 1181 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 KYAT1Q16773 422 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 EFHC2Q5JST6 749 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 RINLQ6ZS11 566 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 RFX8Q6ZV50 586 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 DEFB106AQ8N104 65 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 GSTCDQ8NEC7 633 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ATXN7L3BQ96GX2 97 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 UPF3AQ9H1J1 476 aaKnown RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 ACSS3Q9H6R3 686 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ACSS2Q9NR19 701 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 FAM105AQ9NUU6 356 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 NUP205Q92621 2012 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 A0A1W2PQ45 241 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 A0A1W2PQY0 241 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 TRIM49D1C9J1S8 452 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PIRO00625 290 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 INHBAP08476 426 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ABHD2P08910 425 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 STIP1P31948 543 aaKnown RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 L1CAMP32004 1257 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PCK1P35558 622 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ABCG1P45844 678 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ADIGQ0VDE8 80 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 IFRD2Q12894 506 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 TAZQ16635 292 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PREPLQ4J6C6 727 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 PKDCCQ504Y2 493 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ZCCHC23Q6ZST2 131 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PIGZQ86VD9 579 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 MAP7D3Q8IWC1 876 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 NME8Q8N427 588 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 LRRC37BQ96QE4 947 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 NRDE2Q9H7Z3 1164 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ZMYND8Q9ULU4 1186 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 AP4E1Q9UPM8 1137 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 SNX10Q9Y5X0 201 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 TEX264Q9Y6I9 313 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ATXN2Q99700 1313 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 ENDOD1O94919 500 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 ATP6V1G2O95670 118 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 CCL5P13501 91 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 PHBP35232 272 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 TAF6P49848 677 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 MAP3K7CLP57077 242 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 YWHAZP63104 245 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 CDC42EP1Q00587 391 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 AP1B1Q10567 949 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 NR1H3Q13133 447 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 GALNTL6Q49A17 601 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 BOLA3Q53S33 107 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 TAF1BQ53T94 588 aaPredicted RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 MDH1BQ5I0G3 518 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 TAF2Q6P1X5 1199 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 PCGF5Q86SE9 256 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 TMEM110Q86TL2 294 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 ADGRF2Q8IZF7 708 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 PDCD7Q8N8D1 485 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 DIS3LQ8TF46 1054 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 SLC4A5Q9BY07 1137 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 MTMR10Q9NXD2 777 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 PADI3Q9ULW8 664 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 KLHL33A6NCF5 533 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 FAM72CH0Y354 149 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 EDF1O60869 148 aaKnown RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 HUS1O60921 280 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 PTPN7P35236 360 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 TFDP2Q14188 446 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 KCNJ11Q14654 390 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 PDK4Q16654 411 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 FAM72AQ5TYM5 149 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 KIAA0319Q5VV43 1072 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 FAM72DQ6L9T8 149 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 C16orf46Q6P387 395 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
CUX1-206ENST00000437600 TTC7BQ86TV6 843 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 FAM72BQ86X60 149 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 KCNV2Q8TDN2 545 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 AGAP11Q8TF27 550 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 EDEM1Q92611 657 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 MOCOSQ96EN8 888 aa9.79□□□□□ -0.84
CUX1-206ENST00000437600 STAMBPL1Q96FJ0 436 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms