RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TAC4Q86UU9 113 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 FAM71AQ8IYT1 594 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 FRMD1Q8N878 549 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 PIWIL1Q96J94 861 aaKnown RBP19.05■□□□□ 0.64
HMGN1-207ENST00000436324 LOXL4Q96JB6 756 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 FCRL2Q96LA5 508 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-207ENST00000436324 PDCL3Q9H2J4 239 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 SMOC1Q9H4F8 434 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 STOML2Q9UJZ1 356 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 PCDHGC3Q9UN70 934 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 SDK1Q7Z5N4 2213 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 A0A1W2PQF6 199 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 ZBTB24O43167 697 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-207ENST00000436324 TBL1XO60907 577 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 GRAP2O75791 330 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 MBD3O95983 291 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 MOCS2O96007 188 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-207ENST00000436324 GABRG2P18507 467 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 SLC6A4P31645 630 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 KLK7P49862 253 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 YWHAZP63104 245 aaKnown RBP19.04■□□□□ 0.64
HMGN1-207ENST00000436324 LMNB2Q03252 620 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 SF3A2Q15428 464 aaKnown RBP19.04■□□□□ 0.64
HMGN1-207ENST00000436324 CSRP2Q16527 193 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 STX1AQ16623 288 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 CDKAL1Q5VV42 579 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 TAF3Q5VWG9 929 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 PRR23CQ6ZRP0 262 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 OLIG1Q8TAK6 271 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 IPO4Q8TEX9 1081 aaKnown RBP19.04■□□□□ 0.64
HMGN1-207ENST00000436324 UCMAQ8WVF2 138 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 SORCS1Q8WY21 1168 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 SERPINB11Q96P15 392 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 NOX5Q96PH1 765 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 SLC2A11Q9BYW1 496 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 CIPCQ9C0C6 399 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 LHX5Q9H2C1 402 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 POPDC2Q9HBU9 364 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 STIM2Q9P246 746 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 STON1Q9Y6Q2 735 aa19.04■□□□□ 0.64
HMGN1-207ENST00000436324 EML5Q05BV3 1969 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 SYNJ2BP-COX16A0A087WUM0 186 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 MAP3K13O43283 966 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 TPM2P07951 284 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 UCHL3P15374 230 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 BPIFB4P59827 614 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 PITX1P78337 314 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-207ENST00000436324 CREB5Q02930 508 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 RING1Q06587 406 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 DCAF6Q58WW2 860 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 FAM133BQ5BKY9 247 aaKnown RBP19.03■□□□□ 0.64
HMGN1-207ENST00000436324 ZC3H12AQ5D1E8 599 aaKnown RBP19.03■□□□□ 0.64
HMGN1-207ENST00000436324 PIK3R6Q5UE93 754 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 NADSYN1Q6IA69 706 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 FAM183BPQ6ZVS7 135 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 SPACA7Q96KW9 195 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 GABRG3Q99928 467 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 TRIM62Q9BVG3 475 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 SLC6A17Q9H1V8 727 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 SYNCQ9H7C4 482 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 ELOVL2Q9NXB9 296 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 COX16Q9P0S2 106 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 TLR6Q9Y2C9 796 aa19.03■□□□□ 0.64
HMGN1-207ENST00000436324 MYO18AQ92614 2054 aaKnown RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 PRR5-ARHGAP8B1AHC4 643 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 GFRA2O00451 464 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 TRUB2O95900 331 aaKnown RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 ERBB2P04626 1255 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 MPLP40238 635 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 P2RY2P41231 377 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 IL12RB1P42701 662 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 DHPSP49366 369 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 ZNF445P59923 1031 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 ARHGAP8P85298 464 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 ARID5AQ03989 594 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 MAP7D1Q3KQU3 841 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 TMEM215Q68D42 235 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 C11orf74Q86VG3 221 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 DEFB106AQ8N104 65 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 MYEOVQ96EZ4 313 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 SLC39A13Q96H72 371 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 NAA15Q9BXJ9 866 aaKnown RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 ABCB8Q9NUT2 735 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 CALCOCO1Q9P1Z2 691 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 THAP10Q9P2Z0 257 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 XPO7Q9UIA9 1087 aaKnown RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 MBD1Q9UIS9 605 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 CDV3Q9UKY7 258 aaKnown RBP19.02■□□□□ 0.64
HMGN1-207ENST00000436324 CEP83Q9Y592 693 aa19.02■□□□□ 0.64
HMGN1-207ENST00000436324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 GDF9O60383 454 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 APOEP02649 317 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 CYP11B1P15538 503 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 NDUFV2P19404 249 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 HLA-FP30511 346 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 MYL5Q02045 173 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 NNTQ13423 1086 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 ZNF234Q14588 700 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms