RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SCNN1AP37088 669 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 NOMO3P69849 1222 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 CDR2Q01850 454 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 TAF5Q15542 800 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
SMPD4-207ENST00000435455 ASCL5Q7RTU5 278 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 ERICH1Q86X53 443 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 IL17RCQ8NAC3 791 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 ADAM32Q8TC27 787 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 C18orf8Q96DM3 657 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 SLC39A13Q96H72 371 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 RRN3Q9NYV6 651 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 STARD13Q9Y3M8 1113 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 OTOGLQ3ZCN5 2332 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 GFRA2O00451 464 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 TSPAN3O60637 253 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 APBB3O95704 486 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 SERPINC1P01008 464 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 IGLV3-25P01717 112 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 APOEP02649 317 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 CISD3P0C7P0 127 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 SLC2A3P11169 496 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-207ENST00000435455 GBP1P32455 592 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 DMWDQ09019 674 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 EOGTQ5NDL2 527 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 EMC10Q5UCC4 262 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 TRIM72Q6ZMU5 477 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 DEFB106AQ8N104 65 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 CCDC33Q8N5R6 958 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 ALLCQ8N6M5 410 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 ZNF513Q8N8E2 541 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-207ENST00000435455 SLC20A1Q8WUM9 679 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 TMA16Q96EY4 203 aaKnown RBP16.9■□□□□ 0.3
SMPD4-207ENST00000435455 HHIPQ96QV1 700 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 EPC1Q9H2F5 836 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 FAM204AQ9H8W3 233 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 MYO6Q9UM54 1294 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 SPAG17Q6Q759 2223 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 GVINP1Q7Z2Y8 2422 aa16.9■□□□□ 0.3
SMPD4-207ENST00000435455 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.3
SMPD4-207ENST00000435455 A0A1B0GTH6 734 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 A0A1W2PQC6 194 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 DAB1O75553 588 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 GRAP2O75791 330 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 NOS2P35228 1153 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 DGKEP52429 567 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 FMO1Q01740 532 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 E2F5Q15329 346 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 FAM133BQ5BKY9 247 aaKnown RBP16.89■□□□□ 0.29
SMPD4-207ENST00000435455 MPP7Q5T2T1 576 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 NAA35Q5VZE5 725 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 ATP6V0D2Q8N8Y2 350 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 SUMF1Q8NBK3 374 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 TXNDC5Q8NBS9 432 aaKnown RBP16.89■□□□□ 0.29
SMPD4-207ENST00000435455 TSTD1Q8NFU3 115 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 CPA5Q8WXQ8 436 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 POLR3BQ9NW08 1133 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-207ENST00000435455 TMEM51Q9NW97 253 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.292e-6■□□□□ 11
SMPD4-207ENST00000435455 DDIT4Q9NX09 232 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 SLC12A6Q9UHW9 1150 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 RAB23Q9ULC3 237 aa16.89■□□□□ 0.29
SMPD4-207ENST00000435455 TYW5A2RUC4 315 aaKnown RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 GOLGA6L19H0YKK7 550 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 ALDH1A2O94788 518 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 MOCS2O96007 188 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 FERP16591 822 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 CHRNB2P17787 502 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 HOXD9P28356 352 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 NTSR1P30989 418 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 MATKP42679 507 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 CRY1Q16526 586 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 ZC3H12AQ5D1E8 599 aaKnown RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 PIK3R6Q5UE93 754 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 ANKS1BQ7Z6G8 1248 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 LUZP1Q86V48 1076 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 XYLT1Q86Y38 959 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 ZNF557Q8N988 423 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 HJURPQ8NCD3 748 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 POLMQ9NP87 494 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 EBF1Q9UH73 591 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 SMG5Q9UPR3 1016 aaKnown RBP16.88■□□□□ 0.29
SMPD4-207ENST00000435455 EML5Q05BV3 1969 aa16.88■□□□□ 0.29
SMPD4-207ENST00000435455 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 ANTXRLA6NF34 631 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 PRRT4C9JH25 899 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 SGK1O00141 431 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 NPC1O15118 1278 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 AXIN1O15169 862 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 CYP1A1P04798 512 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 HNRNPLP14866 589 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 ABCB4P21439 1286 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms