RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 GREM1O60565 184 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 LATS1O95835 1130 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 F9P00740 461 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 GZMAP12544 262 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 RRM1P23921 792 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 GALK1P51570 392 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 PTP4A2Q12974 167 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 SLC25A52Q3SY17 297 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
TREX1-201ENST00000433541 CCDC122Q5T0U0 273 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 ADGRF1Q5T601 910 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 HGSNATQ68CP4 663 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 NUDT18Q6ZVK8 323 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 CCDC117Q8IWD4 279 aaPredicted RBP16.12■□□□□ 0.17
TREX1-201ENST00000433541 JOSD2Q8TAC2 188 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 DDX23Q9BUQ8 820 aaKnown RBP16.12■□□□□ 0.17
TREX1-201ENST00000433541 WDCPQ9H6R7 721 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 LMAN1LQ9HAT1 526 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 PARVAQ9NVD7 372 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 DNAJC17Q9NVM6 304 aaKnown RBP16.12■□□□□ 0.17
TREX1-201ENST00000433541 ARHGAP20Q9P2F6 1191 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 DEC1Q9P2X7 70 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 HOXC11O43248 304 aaPredicted RBP16.11■□□□□ 0.17
TREX1-201ENST00000433541 PI15O43692 258 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 ADCY5O95622 1261 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 IGLV3-27P01718 113 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 APODP05090 189 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 GPD1P21695 349 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 AVPR2P30518 371 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 MPPE1Q53F39 396 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 RAP1GAP2Q684P5 730 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 NAIF1Q69YI7 327 aaPredicted RBP16.11■□□□□ 0.17
TREX1-201ENST00000433541 RFWD3Q6PCD5 774 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 CPXM2Q8N436 756 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 TMEM105Q8N8V8 129 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 VCPIP1Q96JH7 1222 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 BTN2A3PQ96KV6 586 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 PNKPQ96T60 521 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 NPY6RQ99463 290 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 ARHGEF4Q9NR80 690 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
TREX1-201ENST00000433541 STIM2Q9P246 746 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 CNOT8Q9UFF9 292 aaKnown RBP16.11■□□□□ 0.17
TREX1-201ENST00000433541 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 SCINQ9Y6U3 715 aa16.11■□□□□ 0.17
TREX1-201ENST00000433541 A0A087X0T9 212 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 GOLGA6L7A0A1B0GV03 622 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 SIGLEC16A6NMB1 481 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 IGLV3-25P01717 112 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 FAM228BP0C875 321 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 MYBL1P10243 752 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 TFE3P19532 575 aaPredicted RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 DRD1P21728 446 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 RFC1P35251 1148 aaPredicted RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 SLC6A11P48066 632 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 SEC13P55735 322 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 C15orf59Q2T9L4 293 aaPredicted RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 DGKKQ5KSL6 1271 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 GRAMD4Q6IC98 578 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 C12orf40Q86WS4 652 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 LGI2Q8N0V4 545 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 SPC24Q8NBT2 197 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 TMA16Q96EY4 203 aaKnown RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 SLC39A13Q96H72 371 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 OSBPL6Q9BZF3 934 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 SIK2Q9H0K1 926 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
TREX1-201ENST00000433541 SPATA6Q9NWH7 488 aaPredicted RBP16.1■□□□□ 0.17
TREX1-201ENST00000433541 TBC1D3BA6NDS4 549 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 F5H5T6 163 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 TBL1XO60907 577 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 TULP3O75386 442 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 EGFP01133 1207 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 OPRD1P41143 372 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 DGKGP49619 791 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 GSCP56915 257 aaPredicted RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 TBX2Q13207 712 aaPredicted RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 PPP2R5DQ14738 602 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 BRMS1LQ5PSV4 323 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 FSTL4Q6MZW2 842 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 ARCQ7LC44 396 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 FAM131BQ86XD5 332 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 HJURPQ8NCD3 748 aaPredicted RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 TKTL2Q9H0I9 626 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 MRPL47Q9HD33 250 aaKnown RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 MARK1Q9P0L2 795 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms