RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ARFGAP2Q8N6H7 521 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ASCC1Q8N9N2 400 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 C12orf57Q99622 126 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 DCLK3Q9C098 648 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 RNPEPQ9H4A4 650 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ACTL8Q9H568 366 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ZDHHC4Q9NPG8 344 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GINS2Q9Y248 185 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 COQ6Q9Y2Z9 468 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 A0A0A0MRY4 1105 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 KIF28PB7ZC32 967 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 EIF3HO15372 352 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GPC4O75487 556 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 MFN2O95140 757 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 MMP2P08253 660 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CTSHP09668 335 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 FAM228BP0C875 321 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CPB1P15086 417 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 HLA-DPA1P20036 260 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 S100A7P31151 101 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CCR9P51686 369 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 PURAQ00577 322 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GALK2Q01415 458 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ZC2HC1CQ53FD0 456 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GTF2IRD2BQ6EKJ0 949 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GTF2IRD2Q86UP8 949 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GRAMD1CQ8IYS0 662 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ATAD1Q8NBU5 361 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NOA1Q8NC60 698 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 SLC37A3Q8NCC5 494 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CLHC1Q8NHS4 586 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ADAM32Q8TC27 787 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 SH3RF3Q8TEJ3 882 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 WFIKKN2Q8TEU8 576 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 EDC3Q96F86 508 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF570Q96NI8 536 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 KCNC2Q96PR1 638 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 KLF6Q99612 283 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 C17orf80Q9BSJ5 609 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NOL11Q9H8H0 719 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ECT2Q9H8V3 914 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ADPRHL2Q9NX46 363 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GIN1Q9NXP7 522 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 HECAQ9UBI9 543 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TNNQ9UQP3 1299 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 KIF13AQ9H1H9 1805 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 DISP3Q9P2K9 1392 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 H7C0S8 307 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 SMAD7O15105 426 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 LYPLA2O95372 231 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 PABPC1P11940 636 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GSTM5P46439 218 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CAMLGP49069 296 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 GRIN2CQ14957 1233 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TBCELQ5QJ74 424 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 C10orf120Q5SQS8 335 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TRAF7Q6Q0C0 670 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ABRAXAS1Q6UWZ7 409 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NSMFQ6X4W1 530 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CCNJLQ8IV13 435 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 IFT20Q8IY31 132 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 CPA6Q8N4T0 437 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ADCY4Q8NFM4 1077 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 REXO5Q96IC2 774 aaKnown RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NT5C1BQ96P26 610 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 INPP4AQ96PE3 977 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 BBS4Q96RK4 519 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 WRNIP1Q96S55 665 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ELF4Q99607 663 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 VRK1Q99986 396 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF518BQ9C0D4 1074 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 NOD1Q9Y239 953 aa5.51□□□□□ -1.53
PTPN4-203ENST00000430976 TNKSO95271 1327 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 A0A087WWV3 80 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TXNDC9O14530 226 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FBXO24O75426 580 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SLITRK5O94991 958 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SYF2O95926 243 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 LRG1P02750 347 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CAPNS1P04632 268 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CALB2P22676 271 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 MAT2AP31153 395 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 HSPA9P38646 679 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 KPNA2P52292 529 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 EIF3EP60228 445 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 UBE2HP62256 183 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SULT2A1Q06520 285 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 DUSP4Q13115 394 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 HNRNPDQ14103 355 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SEC23BQ15437 767 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PERM1Q5SV97 790 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 AFMIDQ63HM1 303 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF783Q6ZMS7 281 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF765Q7L2R6 523 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 EFL1Q7Z2Z2 1120 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PIWIL3Q7Z3Z3 882 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms