RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 SLC45A4Q5BKX6 768 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 HEATR6Q6AI08 1181 aaKnown RBP10.46□□□□□ -0.73
RPE-206ENST00000429921 CASC4Q6P4E1 433 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 PPP1R21Q6ZMI0 780 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 ARHGEF18Q6ZSZ5 1173 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 BHLHA9Q7RTU4 235 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 MRPL10Q7Z7H8 261 aaKnown RBP10.46□□□□□ -0.73
RPE-206ENST00000429921 MICALL1Q8N3F8 863 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 NPWQ8N729 165 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 GLT1D1Q96MS3 346 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 TKTL2Q9H0I9 626 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 STMN4Q9H169 189 aaPredicted RBP10.46□□□□□ -0.73
RPE-206ENST00000429921 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 PLAC1Q9HBJ0 212 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 SMYD2Q9NRG4 433 aa10.46□□□□□ -0.73
RPE-206ENST00000429921 TOP3BO95985 862 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 ERCC2P18074 760 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 CA4P22748 312 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ADRA1BP35368 520 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 MSH2P43246 934 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 GEMIN4P57678 1058 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 DNAJC3Q13217 504 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 TCTN1Q2MV58 587 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ANKRD20A2Q5SQ80 823 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ANKRD20A1Q5TYW2 823 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ANKRD20A3Q5VUR7 823 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 RWDD4Q6NW29 188 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 STRADAQ7RTN6 431 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 TAC4Q86UU9 113 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 METTL23Q86XA0 190 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 OTUD6BQ8N6M0 293 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ATP11CQ8NB49 1132 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 COLGALT1Q8NBJ5 622 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 SMC1BQ8NDV3 1235 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 P2RY11Q96G91 374 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 TGS1Q96RS0 853 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 WDR6Q9NNW5 1121 aaKnown RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 SLCO1B3Q9NPD5 702 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 PAK5Q9P286 719 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 SLC17A7Q9P2U7 560 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 CDH9Q9ULB4 789 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 ZMYND8Q9ULU4 1186 aaPredicted RBP10.46□□□□□ -0.74
RPE-206ENST00000429921 TTLL3Q9Y4R7 772 aa10.46□□□□□ -0.74
RPE-206ENST00000429921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 A0A1W2PQ45 241 aaPredicted RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 A0A1W2PQY0 241 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 BCLAF3A2AJT9 711 aaKnown RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 RNF103O00237 685 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 PSMB4P28070 264 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 INTS6LQ5JSJ4 861 aaKnown RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 ARHGAP36Q6ZRI8 547 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 RFX8Q6ZV50 586 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 KDELC2Q7Z4H8 507 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 TADA2BQ86TJ2 420 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 RELL1Q8IUW5 271 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 CACNA2D3Q8IZS8 1091 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 PCSK9Q8NBP7 692 aaKnown RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 DCAKDQ8WVC6 231 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 HTR3CQ8WXA8 447 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SMARCD1Q96GM5 515 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SERAC1Q96JX3 654 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 TTC25Q96NG3 672 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 STARD7Q9NQZ5 370 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 NKIRAS1Q9NYS0 192 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 ZC3H7BQ9UGR2 993 aaKnown RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 LGALS13Q9UHV8 139 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 STAP1Q9ULZ2 295 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 TEX264Q9Y6I9 313 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SHROOM3Q8TF72 1996 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 WDR27A2RRH5 827 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 CORO7P57737 925 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 NOGQ13253 232 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 PTK7Q13308 1070 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 TUSC3Q13454 348 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 FAM133BQ5BKY9 247 aaKnown RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 GKAP1Q5VSY0 366 aaPredicted RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 ZNF534Q76KX8 674 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 CDKL3Q8IVW4 592 aaPredicted RBP10.45□□□□□ -0.74
RPE-206ENST00000429921 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 KCTD13Q8WZ19 329 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SCLYQ96I15 445 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 SLC2A13Q96QE2 648 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 KLC2Q9H0B6 622 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 WDCPQ9H6R7 721 aa10.45□□□□□ -0.74
RPE-206ENST00000429921 DGKIO75912 1065 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 ABHD2P08910 425 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 ABCG1P45844 678 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 TPI1P60174 286 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 LHX8Q68G74 356 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 PID1Q7Z2X4 250 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 VPS52Q8N1B4 723 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
RPE-206ENST00000429921 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.749e-7■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms