RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SMARCD1Q96GM5 515 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 RTP3Q9BQQ7 232 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 PITPNM3Q9BZ71 974 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 PLAC1Q9HBJ0 212 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 CNGB3Q9NQW8 809 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 A0A0A0MRY4 1105 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 IQANK1A0A1B0GTG1 560 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 ZWINTO95229 277 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 MT-ND3P03897 115 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 NCAM1P13591 858 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 PCSK1P29120 753 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 GRIA1P42261 906 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 RAB27AP51159 221 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 NKX3-2P78367 333 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 CAP1Q01518 475 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 AP1B1Q10567 949 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 LPIN1Q14693 890 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 PDK4Q16654 411 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 RAB41Q5JT25 222 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 BZW1Q7L1Q6 419 aaKnown RBP16.76■□□□□ 0.27
MBD4-203ENST00000429544 CTAGE3PQ8IX95 158 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 MPP5Q8N3R9 675 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 PPM1NQ8N819 430 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 SPATA13Q96N96 652 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 ADAM2Q99965 735 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 TRIM56Q9BRZ2 755 aaKnown RBP16.76■□□□□ 0.27
MBD4-203ENST00000429544 ARL2BPQ9Y2Y0 163 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 MAD1L1Q9Y6D9 718 aa16.76■□□□□ 0.27
MBD4-203ENST00000429544 HHLA1C9JL84 531 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM155BO75949 473 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 B3GAT3O94766 335 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 LTFP02788 710 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 RPLP2P05387 115 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 ELNP15502 786 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 MAGEA3P43357 314 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 SEMA5AQ13591 1074 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 DPYSQ14117 519 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 DSC3Q14574 896 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 RFX8Q6ZV50 586 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 CEP41Q9BYV8 373 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 C12orf65Q9H3J6 166 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 WDR6Q9NNW5 1121 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 ANLNQ9NQW6 1124 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 SEPT10Q9P0V9 454 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 CXorf49A8MYA2 514 aaPredicted RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM72CH0Y354 149 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 RNF103O00237 685 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 ZNF623O75123 536 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 C1QAP02745 245 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 ADRA1DP25100 572 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 ADRA1BP35368 520 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 PRKD1Q15139 912 aaPredicted RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM72AQ5TYM5 149 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM72DQ6L9T8 149 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 UNC5AQ6ZN44 842 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 FAM72BQ86X60 149 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 BANPQ8N9N5 519 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 CCNYQ8ND76 341 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 KLHDC9Q8NEP7 349 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 TCP10LQ8TDR4 215 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 LRRC8CQ8TDW0 803 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 EDEM1Q92611 657 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 SERAC1Q96JX3 654 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 PRDM16Q9HAZ2 1276 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 DDIT4Q9NX09 232 aa16.75■□□□□ 0.27
MBD4-203ENST00000429544 AMHP03971 560 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 METTL23Q86XA0 190 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 TP53INP2Q8IXH6 220 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 P2RY11Q96G91 374 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 SIGLEC10Q96LC7 697 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 SLCO1B3Q9NPD5 702 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
MBD4-203ENST00000429544 SLC17A7Q9P2U7 560 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 PRKAG3Q9UGI9 489 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
MBD4-203ENST00000429544 A0A0U1RQF3 1178 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 C9IYK1 514 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 APOEP02649 317 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 BDNFP23560 247 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 FDFT1P37268 417 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 PAFAH1B3Q15102 231 aaKnown RBP16.74■□□□□ 0.27
MBD4-203ENST00000429544 PDK1Q15118 436 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 RGS9BPQ6ZS82 235 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 BHLHA9Q7RTU4 235 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 SLC26A11Q86WA9 606 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 GRAMD1AQ96CP6 724 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 THOC1Q96FV9 657 aaKnown RBP16.74■□□□□ 0.27
MBD4-203ENST00000429544 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 XAB2Q9HCS7 855 aaKnown RBP16.74■□□□□ 0.27
MBD4-203ENST00000429544 PHTF1Q9UMS5 762 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
MBD4-203ENST00000429544 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.276e-12■■■■■ 56
MBD4-203ENST00000429544 WDR91A4D1P6 747 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms