RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PIP4K2CQ8TBX8 421 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 MAGEC3Q8TD91 643 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 DCAKDQ8WVC6 231 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 INPP5DQ92835 1189 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ZNF669Q96BR6 464 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 SLC7A6OSQ96CW6 309 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 SGF29Q96ES7 293 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PEBP4Q96S96 227 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 EBF4Q9BQW3 602 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RNPEPQ9H4A4 650 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ETNK2Q9NVF9 386 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SNTG2Q9NY99 539 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TYROBPO43914 113 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 LMNAP02545 664 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 HOXC6P09630 235 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ERVK-10P10266 1014 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 VDRP11473 427 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TPH1P17752 444 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 MGAT1P26572 445 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SP3Q02447 781 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ASPHQ12797 758 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 OLIG2Q13516 323 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 MOGSQ13724 837 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 GEN1Q17RS7 908 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 FAM47CQ5HY64 1035 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 N4BP2L1Q5TBK1 243 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 DPP9Q86TI2 863 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 IFNL1Q8IU54 200 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PYROXD2Q8N2H3 581 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 BANPQ8N9N5 519 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ANKLE1Q8NAG6 615 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 KLHL23Q8NBE8 558 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 DENND1AQ8TEH3 1009 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SPACA7Q96KW9 195 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RNF157Q96PX1 679 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TUBB6Q9BUF5 446 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SIK2Q9H0K1 926 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ZCWPW1Q9H0M4 648 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 CPSF3Q9UKF6 684 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 ANGPTL2Q9UKU9 493 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 AP4E1Q9UPM8 1137 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TCEA3O75764 348 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 STBD1O95210 358 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PSMG1O95456 288 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 CSH1P0DML2 217 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 CSH2P0DML3 217 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 GNAT1P11488 350 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 AVPR1AP37288 418 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SULT1E1P49888 294 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 YWHAZP63104 245 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 SLC25A11Q02978 314 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 ACVR2BQ13705 512 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TRIP10Q15642 601 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 TNFAIP8L3Q5GJ75 292 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PPM1JQ5JR12 505 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PMF1Q6P1K2 205 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 CDKL3Q8IVW4 592 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 ARFGAP1Q8N6T3 406 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 AFG1LQ8WV93 481 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 MIPEPQ99797 713 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SMARCAD1Q9H4L7 1026 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 APOEP02649 317 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 C6orf222P0C671 652 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 CCNB1P14635 433 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TFE3P19532 575 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 SOX11P35716 441 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 SERPINB5P36952 375 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ARL1P40616 181 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 AP2B1P63010 937 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TTLL4Q14679 1199 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ALKBH2Q6NS38 261 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 RWDD4Q6NW29 188 aaKnown RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 ASRGL1Q7L266 308 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 CMC1Q7Z7K0 106 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 SIX6OS1Q8N1H7 587 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PLD5Q8N7P1 536 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 RBM15BQ8NDT2 890 aaKnown RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 GSTCDQ8NEC7 633 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 CHST13Q8NET6 341 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 FAXDC2Q96IV6 333 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PCYT2Q99447 389 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TMEM134Q9H6X4 195 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 XAB2Q9HCS7 855 aaKnown RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 CASP8AP2Q9UKL3 1982 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 NFASCO94856 1347 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 DCXO43602 365 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TBX10O75333 385 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 METTL18O95568 372 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PROCP04070 461 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 RARBP10826 455 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 SKIV2L2P42285 1042 aaKnown RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 ZNF143P52747 638 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 SLC34A1Q06495 639 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms