RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 ACSL4O60488 711 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 MYBL1P10243 752 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 SLC2A3P11169 496 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 GALCP54803 685 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 PRKCQQ04759 706 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 GAD2Q05329 585 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 ADGRF1Q5T601 910 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 Q6ZNB5 142 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.12■□□□□ 0.01
SGCE-204ENST00000428696 RALGPS2Q86X27 583 aaPredicted RBP15.12■□□□□ 0.01
SGCE-204ENST00000428696 CTNNBL1Q8WYA6 563 aaPredicted RBP15.12■□□□□ 0.01
SGCE-204ENST00000428696 DDX50Q9BQ39 737 aaKnown RBP15.12■□□□□ 0.01
SGCE-204ENST00000428696 MRPL47Q9HD33 250 aaKnown RBP15.12■□□□□ 0.01
SGCE-204ENST00000428696 PIGVQ9NUD9 493 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 STIM2Q9P246 746 aa15.12■□□□□ 0.01
SGCE-204ENST00000428696 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 C2CD4BA6NLJ0 364 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 TYRP14679 529 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 GLULP15104 373 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 PSMA2P25787 234 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 CTHP32929 405 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 RDXP35241 583 aaKnown RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 SLC6A11P48066 632 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 GALK1P51570 392 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 RING1Q06587 406 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 SPA17Q15506 151 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 RAP1GAP2Q684P5 730 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 NAIF1Q69YI7 327 aaPredicted RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 TXNDC11Q6PKC3 985 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 CHSY1Q86X52 802 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 FAM131BQ86XD5 332 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 CHFRQ96EP1 664 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 TMA16Q96EY4 203 aaKnown RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 TKTL2Q9H0I9 626 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 XPO7Q9UIA9 1087 aaKnown RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 SIT1Q9Y3P8 196 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 MTF2Q9Y483 593 aaPredicted RBP15.11■□□□□ 0.01
SGCE-204ENST00000428696 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 SCINQ9Y6U3 715 aa15.11■□□□□ 0.01
SGCE-204ENST00000428696 CUL9Q8IWT3 2517 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 KANSL1LA0AUZ9 987 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 KCNU1A8MYU2 1149 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 TBL1XO60907 577 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 IGLV3-25P01717 112 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 IGLV3-27P01718 113 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 DCNP07585 359 aaKnown RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 SSR1P43307 286 aaKnown RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 KDSRQ06136 332 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 GRSF1Q12849 480 aaKnown RBP eCLIP15.1■□□□□ 0.01
SGCE-204ENST00000428696 NNTQ13423 1086 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 RAB6CQ53S08 254 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 TMEM31Q5JXX7 168 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 PLEKHA7Q6IQ23 1121 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 LGI2Q8N0V4 545 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 CFAP52Q8N1V2 620 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 KIAA1958Q8N8K9 716 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 SLC39A13Q96H72 371 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 BTN2A3PQ96KV6 586 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 XPO6Q96QU8 1125 aaKnown RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 BAG1Q99933 345 aaPredicted RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 P2RY13Q9BPV8 354 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 CNPY3Q9BT09 278 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 NUP85Q9BW27 656 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 C1QTNF1Q9BXJ1 281 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 PACSIN1Q9BY11 444 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 ADAM33Q9BZ11 813 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 RAB6CQ9H0N0 254 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 TMPRSS4Q9NRS4 437 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 DNAJC17Q9NVM6 304 aaKnown RBP15.1■□□□□ 0.01
SGCE-204ENST00000428696 CTTNBP2NLQ9P2B4 639 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 SNX10Q9Y5X0 201 aa15.1■□□□□ 0.01
SGCE-204ENST00000428696 SOWAHDA6NJG2 315 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 PAGE1O75459 146 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 IPO7O95373 1038 aaKnown RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 GGCXP38435 758 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 MAGEA1P43355 309 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 CXCR3P49682 368 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ZNF143P52747 638 aaPredicted RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 STARD6P59095 220 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 MPPE1Q53F39 396 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 NADSYN1Q6IA69 706 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ARCQ7LC44 396 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 CCDC117Q8IWD4 279 aaPredicted RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 CD101Q93033 1021 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 NT5C3BQ969T7 300 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ARHGEF26Q96DR7 871 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 NELL2Q99435 816 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 LMAN1LQ9HAT1 526 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms