RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GDPD5Q8WTR4 605 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SNAP91O60641 907 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PMPCBO75439 489 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MMP10P09238 476 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 LTKP29376 864 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MOXD1Q6UVY6 613 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 TBCBQ99426 244 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 LBHD1Q9BQE6 289 aaPredicted RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 AGPAT5Q9NUQ2 364 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SIK3Q9Y2K2 1263 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PCDHGA4Q9Y5G9 962 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 CBFA2T3O75081 653 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 ITGA2P17301 1181 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MMP14P50281 582 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MTDHQ86UE4 582 aaKnown RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 DEPDC4Q8N2C3 294 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 OR52L1Q8NGH7 329 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 GPAMQ9HCL2 828 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 GSG1L2A8MUP6 293 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 CLOCKO15516 846 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 CYP1A1P04798 512 aaPredicted RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 STRIP1Q5VSL9 837 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 SUSD4Q5VX71 490 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 TNPO3Q9Y5L0 923 aaKnown RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 MGAT5BQ3V5L5 792 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 B3GALNT2Q8NCR0 500 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DPY30Q9C005 99 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 COQ6Q9Y2Z9 468 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DDHD2O94830 711 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 VDRP11473 427 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 LHX1P48742 406 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 SPP2Q13103 211 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 FAM187BQ17R55 369 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 BICRALQ6AI39 1079 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 STX12Q86Y82 276 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF655Q8N720 491 aaPredicted RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ACTR8Q9H981 624 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 PCNAP12004 261 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ALDH7A1P49419 539 aaKnown RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DENND5BQ6ZUT9 1274 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF671Q8TAW3 534 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 RAD18Q9NS91 495 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 USP18Q9UMW8 372 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 BAIAP3O94812 1187 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ALOX5P09917 674 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DMPKQ09013 629 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ATP1A4Q13733 1029 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 COMMD2Q86X83 199 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 SLC1A6P48664 564 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 RPL19P84098 196 aaKnown RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ZSWIM7Q19AV6 140 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC80Q76M96 950 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DAGLBQ8NCG7 672 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 VMP1Q96GC9 406 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 APOPT1Q96IL0 206 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 RGS14O43566 566 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 NDUFB5O43674 189 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ALOX12P18054 663 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 OGNP20774 298 aaKnown RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 ADARP55265 1226 aaKnown RBP14.78□□□□□ -0.04
PTPN13-203ENST00000427191 PAGE2BQ5JRK9 111 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 NYAP1Q6ZVC0 841 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 VN1R5Q7Z5H4 357 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 GPRASP2Q96D09 838 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 PLA2G12BQ9BX93 195 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 EVA1BQ9NVM1 165 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 DNAJC16Q9Y2G8 782 aa14.78□□□□□ -0.04
PTPN13-203ENST00000427191 MED24O75448 989 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 TCF4P15884 667 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 ITGB6P18564 788 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 ME2P23368 584 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 PANX3Q96QZ0 392 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 REEP1Q9H902 201 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 DPP3Q9NY33 737 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 TRHDEQ9UKU6 1024 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 MFHAS1Q9Y4C4 1052 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 H3BN98 237 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 GPR15P49685 360 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 CASKIN2Q8WXE0 1202 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 PRDM5Q9NQX1 630 aaPredicted RBP14.77□□□□□ -0.04
PTPN13-203ENST00000427191 PNMA8BQ9ULN7 279 aaPredicted RBP14.77□□□□□ -0.04
PTPN13-203ENST00000427191 LBPP18428 481 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 ERFP50548 548 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 AGKQ53H12 422 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 ITIH5Q86UX2 942 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 C8orf59Q8N0T1 100 aaPredicted RBP14.77□□□□□ -0.04
PTPN13-203ENST00000427191 L2HGDHQ9H9P8 463 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 CHST12Q9NRB3 414 aa14.77□□□□□ -0.04
PTPN13-203ENST00000427191 EPN2O95208 641 aa14.77□□□□□ -0.05
PTPN13-203ENST00000427191 FAUP35544 74 aaKnown RBP14.77□□□□□ -0.05
PTPN13-203ENST00000427191 GALNT18Q6P9A2 607 aa14.77□□□□□ -0.05
PTPN13-203ENST00000427191 DHRSXQ8N5I4 330 aa14.77□□□□□ -0.05
PTPN13-203ENST00000427191 OR7A2PQ8NGA2 310 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms