RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SDR42E2A6NKP2 422 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 NDC80O14777 642 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 ATG7O95352 703 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 CD1EP15812 388 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 GRIA1P42261 906 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 RANBP1P43487 201 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 RPL10AP62906 217 aaKnown RBP14.81□□□□□ -0.04
MSH5-206ENST00000423982 CCNIQ14094 377 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 C15orf59Q2T9L4 293 aaPredicted RBP14.81□□□□□ -0.04
MSH5-206ENST00000423982 ATG16L1Q676U5 607 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 DHDDSQ86SQ9 333 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 PDSS2Q86YH6 399 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 THNSL1Q8IYQ7 743 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 FAM172AQ8WUF8 416 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 PPP2R3CQ969Q6 453 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 PIWIL1Q96J94 861 aaKnown RBP14.81□□□□□ -0.04
MSH5-206ENST00000423982 APBA2Q99767 749 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 NIF3L1Q9GZT8 377 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 HMGXB4Q9UGU5 601 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 MAD1L1Q9Y6D9 718 aa14.81□□□□□ -0.04
MSH5-206ENST00000423982 LOC100653049A0A140TA62 436 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TXNDC9O14530 226 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 SNNO75324 88 aaPredicted RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 KRT34O76011 436 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 PGM3O95394 542 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 PROCP04070 461 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 OATP04181 439 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 BPGMP07738 259 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 KCNA4P22459 653 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 EIF4BP23588 611 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 RBL1P28749 1068 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TNFAIP2Q03169 654 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 ENPEPQ07075 957 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TUBB3Q13509 450 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 HIC1Q14526 733 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 DNAL1Q4LDG9 190 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 MARK2Q7KZI7 788 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 OR6J1Q8NGC5 347 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TRIB2Q92519 343 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 USP29Q9HBJ7 922 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 PIH1D1Q9NWS0 290 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 PCDHGB4Q9UN71 923 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 SOX13Q9UN79 622 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 DNAJC16Q9Y2G8 782 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 PCDHGB5Q9Y5G0 923 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TRUB2O95900 331 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 SERPINA6P08185 405 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 ASPAP45381 313 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TAP1Q03518 808 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 STX3Q13277 289 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TBC1D25Q3MII6 688 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 EFHC1Q5JVL4 640 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TMCO4Q5TGY1 634 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 TRNP1Q6NT89 227 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 UNC5AQ6ZN44 842 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 XYLT1Q86Y38 959 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 CMASQ8NFW8 434 aaPredicted RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 RDM1Q8NG50 284 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 NMD3Q96D46 503 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 TWNKQ96RR1 684 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 PPP1R16BQ96T49 567 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 XAB2Q9HCS7 855 aaKnown RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 CLIC5Q9NZA1 410 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 EFR3BQ9Y2G0 817 aa14.8□□□□□ -0.04
MSH5-206ENST00000423982 MAFBQ9Y5Q3 323 aaPredicted RBP14.8□□□□□ -0.04
MSH5-206ENST00000423982 BEX3Q00994 111 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 NOMO1Q15155 1222 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 FBXL19Q6PCT2 694 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 MAVSQ7Z434 540 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 HPS6Q86YV9 775 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 LRRC71Q8N4P6 559 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 STKLD1Q8NE28 680 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 SOCS4Q8WXH5 440 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 RNPEPQ9H4A4 650 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 ETNK2Q9NVF9 386 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 LAMA2P24043 3122 aaKnown RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 GSRP00390 522 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 ARRB2P32121 409 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 CDH5P33151 784 aaPredicted RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 PPP1R14CQ8TAE6 165 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 GDPD5Q8WTR4 605 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 PNPOQ9NVS9 261 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 MYO18AQ92614 2054 aaKnown RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 GJB1P08034 283 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 F7P08709 466 aaPredicted RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 CRADDP78560 199 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 FASTKD1Q53R41 847 aaKnown RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 FAM160B1Q5W0V3 765 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 SLFN12LQ6IEE8 588 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 CYP4V2Q6ZWL3 525 aaPredicted RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 ACAD11Q709F0 780 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 DRAXINQ8NBI3 349 aaPredicted RBP14.79□□□□□ -0.04
MSH5-206ENST00000423982 CENPKQ9BS16 269 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 PCDHGC3Q9UN70 934 aa14.79□□□□□ -0.04
MSH5-206ENST00000423982 FAM189A1O60320 539 aa14.78□□□□□ -0.04
MSH5-206ENST00000423982 APOEP02649 317 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms