RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 NELL1Q92832 810 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 TMA16Q96EY4 203 aaKnown RBP11.39□□□□□ -0.59
USP49-204ENST00000423567 FUCA2Q9BTY2 467 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 HSD3B7Q9H2F3 369 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 SLC12A6Q9UHW9 1150 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 RAB23Q9ULC3 237 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 TLR6Q9Y2C9 796 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 CCDC163A0A0D9SF12 145 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 K7ESF4 209 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 EPHB6O15197 1021 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 LILRB5O75023 590 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 ALDH1A2O94788 518 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 KLF8O95600 359 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 APBB3O95704 486 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 PENKP01210 267 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 ERBB2P04626 1255 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 FYNP06241 537 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 SLC2A3P11169 496 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 CDH5P33151 784 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 CDR2Q01850 454 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 SLC6A3Q01959 620 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 E2F5Q15329 346 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 ZSCAN23Q3MJ62 389 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 PTPN20Q4JDL3 420 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 FYB2Q5VWT5 728 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 SYPL2Q5VXT5 272 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 TRIM72Q6ZMU5 477 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 APTXQ7Z2E3 356 aaKnown RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 CCDC117Q8IWD4 279 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 FAM217AQ8IXS0 508 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 DEFB106AQ8N104 65 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 PHTF2Q8N3S3 785 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 CCDC33Q8N5R6 958 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 ALLCQ8N6M5 410 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 ZNF557Q8N988 423 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 TXNDC5Q8NBS9 432 aaKnown RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 EPS8L1Q8TE68 723 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 UCMAQ8WVF2 138 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 RNF34Q969K3 372 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 AZIN2Q96A70 460 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 C18orf8Q96DM3 657 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 HHIPQ96QV1 700 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 HINFPQ9BQA5 517 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
USP49-204ENST00000423567 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 TJP2Q9UDY2 1190 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 STOML2Q9UJZ1 356 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 STAP1Q9ULZ2 295 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 MMP17Q9ULZ9 603 aa11.38□□□□□ -0.59
USP49-204ENST00000423567 TRIM24O15164 1050 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 IRAK2O43187 625 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 ACSL4O60488 711 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 TSPAN3O60637 253 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 DAB1O75553 588 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 GRAP2O75791 330 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 IGLV3-27P01718 113 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 MMEP08473 750 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 FERP16591 822 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 DGKEP52429 567 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP49-204ENST00000423567 ARID5AQ03989 594 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 MESP2Q0VG99 397 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 MTA1Q13330 715 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 IQCB1Q15051 598 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 TAF5Q15542 800 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 CEP68Q76N32 757 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 SLC26A9Q7LBE3 791 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 WDR5BQ86VZ2 330 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 IL17RCQ8NAC3 791 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 ZNF397Q8NF99 534 aaPredicted RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 DDX1Q92499 740 aaKnown RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 PIWIL1Q96J94 861 aaKnown RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 SLC2A13Q96QE2 648 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 CBX8Q9HC52 389 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 SEPT11Q9NVA2 429 aaKnown RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP49-204ENST00000423567 DDIT4Q9NX09 232 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 RRN3Q9NYV6 651 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
USP49-204ENST00000423567 SLC27A6Q9Y2P4 619 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 STARD13Q9Y3M8 1113 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 WDFY4Q6ZS81 3184 aa11.37□□□□□ -0.59
USP49-204ENST00000423567 SYNJ2BP-COX16A0A087WUM0 186 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 A0A1B0GTH6 734 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms